RNA–Protein interactions for RNA: ENST00000495546.1

C2orf88-209, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 4

Gene C2orf88, Length 387 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-209ENST00000495546 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.9□□□□□ -0.34
C2orf88-209ENST00000495546 TRAV38-1A0A0B4J264 116 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 C3orf80F5H4A9 247 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 PIN1P1O15428 100 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 AKR7A2O43488 359 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 SC5DO75845 299 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 HEXAP06865 529 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 WNT2P09544 360 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 PGA5P0DJD9 388 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 MUC1P15941 1255 aaPredicted RBP12.89□□□□□ -0.35
C2orf88-209ENST00000495546 CPEP16870 476 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 FSTP19883 344 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 ERVK11-1P61568 191 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 UBE2UQ5VVX9 321 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 LIPKQ5VXJ0 399 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 CYB5R2Q6BCY4 276 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 SFRP4Q6FHJ7 346 aaPredicted RBP12.89□□□□□ -0.35
C2orf88-209ENST00000495546 ZNF773Q6PK81 442 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 CLEC9AQ6UXN8 241 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 UNQ9370/PRO34162Q6UXP9 181 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 DCDC5Q6ZRR9 648 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 LHFPL2Q6ZUX7 228 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 SVOPQ8N4V2 548 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 BOLLQ8N9W6 283 aaKnown RBP12.89□□□□□ -0.35
C2orf88-209ENST00000495546 POC1AQ8NBT0 407 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 DEFB108BQ8NET1 73 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 OR51A2Q8NGJ7 313 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 ZNF671Q8TAW3 534 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 UFD1Q92890 307 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 C12orf43Q96C57 262 aaKnown RBP12.89□□□□□ -0.35
C2orf88-209ENST00000495546 ORAI1Q96D31 301 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 SEH1LQ96EE3 360 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 DERL3Q96Q80 235 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 OR14A2Q96R54 314 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 NRIP2Q9BQI9 281 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 HES4Q9HCC6 221 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 TAS2R4Q9NYW5 299 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 LRCH1Q9Y2L9 728 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 POLDIP2Q9Y2S7 368 aa12.89□□□□□ -0.35
C2orf88-209ENST00000495546 SF3B6Q9Y3B4 125 aaKnown RBP12.89□□□□□ -0.35
C2orf88-209ENST00000495546 ZNF879B4DU55 563 aa12.88□□□□□ -0.35
C2orf88-209ENST00000495546 RAB3AP20336 220 aa12.88□□□□□ -0.35
C2orf88-209ENST00000495546 ATP1B3P54709 279 aa12.88□□□□□ -0.35
C2orf88-209ENST00000495546 MTCP1P56278 107 aa12.88□□□□□ -0.35
C2orf88-209ENST00000495546 LYPD2Q6UXB3 125 aa12.88□□□□□ -0.35
C2orf88-209ENST00000495546 PHC2Q8IXK0 858 aa12.88□□□□□ -0.35
C2orf88-209ENST00000495546 LINC01356Q8N9X3 169 aa12.88□□□□□ -0.35
C2orf88-209ENST00000495546 MTCH1Q9NZJ7 389 aa12.88□□□□□ -0.35
C2orf88-209ENST00000495546 KAAG1Q9UBP8 84 aa12.88□□□□□ -0.35
C2orf88-209ENST00000495546 MIOXQ9UGB7 285 aa12.88□□□□□ -0.35
C2orf88-209ENST00000495546 NSD1Q96L73 2696 aaPredicted RBP12.88□□□□□ -0.35
C2orf88-209ENST00000495546 IGHV3OR15-7A0A075B7D8 119 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 A8MXK9 166 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 B4DSR2 109 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 NDUFA2O43678 99 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 ALDOBP05062 364 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 HSMCR30P0CW71 290 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 ZNF16P17020 682 aaPredicted RBP12.87□□□□□ -0.35
C2orf88-209ENST00000495546 AMY2BP19961 511 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 GLRA1P23415 457 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 GP2P55259 537 aaKnown RBP12.87□□□□□ -0.35
C2orf88-209ENST00000495546 ZP1P60852 638 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 SEC61A1P61619 476 aaKnown RBP12.87□□□□□ -0.35
C2orf88-209ENST00000495546 INSL4Q14641 139 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 KCNJ8Q15842 424 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 SSX1Q16384 188 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 MICBQ29980 383 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 ATPAF1Q5TC12 328 aaPredicted RBP12.87□□□□□ -0.35
C2orf88-209ENST00000495546 STUMQ69YW2 141 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 ZNF841Q6ZN19 808 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 THRSPQ92748 146 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 ZNF488Q96MN9 340 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 SPACA5Q96QH8 159 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 RASL12Q9NYN1 266 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 CTSZQ9UBR2 303 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 ZNF222Q9UK12 451 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 PCDHB10Q9UN67 800 aa12.87□□□□□ -0.35
C2orf88-209ENST00000495546 POLR3KQ9Y2Y1 108 aaPredicted RBP12.87□□□□□ -0.35
C2orf88-209ENST00000495546 TRAV8-7A0A075B6U6 113 aa12.86□□□□□ -0.35
C2orf88-209ENST00000495546 KIAA1324LA8MWY0 1029 aaPredicted RBP12.86□□□□□ -0.35
C2orf88-209ENST00000495546 FCN3O75636 299 aa12.86□□□□□ -0.35
C2orf88-209ENST00000495546 GYPAP02724 150 aa12.86□□□□□ -0.35
C2orf88-209ENST00000495546 MSMBP08118 114 aa12.86□□□□□ -0.35
C2orf88-209ENST00000495546 RPS2P15880 293 aaKnown RBP12.86□□□□□ -0.35
C2orf88-209ENST00000495546 ZFP36P26651 326 aaKnown RBP12.86□□□□□ -0.35
C2orf88-209ENST00000495546 MAPK3P27361 379 aaPredicted RBP12.86□□□□□ -0.35
C2orf88-209ENST00000495546 TGFBR2P37173 567 aa12.86□□□□□ -0.35
C2orf88-209ENST00000495546 RPS25P62851 125 aaKnown RBP12.86□□□□□ -0.35
C2orf88-209ENST00000495546 PDZK1IP1Q13113 114 aa12.86□□□□□ -0.35
C2orf88-209ENST00000495546 KISS1Q15726 138 aa12.86□□□□□ -0.35
C2orf88-209ENST00000495546 ACSM3Q53FZ2 586 aa12.86□□□□□ -0.35
C2orf88-209ENST00000495546 ACP7Q6ZNF0 438 aa12.86□□□□□ -0.35
C2orf88-209ENST00000495546 SLC25A26Q70HW3 274 aa12.86□□□□□ -0.35
C2orf88-209ENST00000495546 ANGPTL6Q8NI99 470 aa12.86□□□□□ -0.35
C2orf88-209ENST00000495546 FCGR1BQ92637 280 aa12.86□□□□□ -0.35
C2orf88-209ENST00000495546 NEIL1Q96FI4 390 aaPredicted RBP12.86□□□□□ -0.35
C2orf88-209ENST00000495546 TMED9Q9BVK6 235 aa12.86□□□□□ -0.35
C2orf88-209ENST00000495546 NEK6Q9HC98 313 aa12.86□□□□□ -0.35
C2orf88-209ENST00000495546 TMEM138Q9NPI0 162 aa12.86□□□□□ -0.35
C2orf88-209ENST00000495546 NLKQ9UBE8 527 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms