RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 ACAA1P09110 424 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-235ENST00000495515 GLRA1P23415 457 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 BDKRB2P30411 391 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 CD80P33681 288 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 POU3F4P49335 361 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 NEDD8Q15843 81 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 ZNF404Q494X3 552 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 FAM201AQ5SY85 155 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 UNQ9370/PRO34162Q6UXP9 181 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 CEACAM19Q7Z692 300 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 CALHM1Q8IU99 346 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 CIARTQ8N365 385 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-235ENST00000495515 POC1AQ8NBT0 407 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 DEFB108BQ8NET1 73 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 TMIGD2Q96BF3 282 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 C12orf43Q96C57 262 aaKnown RBP14.35□□□□□ -0.11
HDAC6-235ENST00000495515 GPER1Q99527 375 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 TCF7L1Q9HCS4 588 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 NOX4Q9NPH5 578 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 NDUFB11Q9NX14 153 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 DYSFO75923 2080 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 IGKV1-27A0A075B6S5 117 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 A0A1W2PPK0 400 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 MEGF11A6BM72 1044 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 C3orf80F5H4A9 247 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 SYNGR1O43759 233 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 NOS1APO75052 506 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-235ENST00000495515 ARL6IP5O75915 188 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 INMTO95050 263 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 PLATP00750 562 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 IGFBP3P17936 291 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-235ENST00000495515 GZMKP49863 264 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 RPS25P62851 125 aaKnown RBP14.34□□□□□ -0.11
HDAC6-235ENST00000495515 HNRNPA0Q13151 305 aaKnown RBP14.34□□□□□ -0.11
HDAC6-235ENST00000495515 KISS1Q15726 138 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 TMEM249Q2WGJ8 235 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 SMIM21Q3B7S5 101 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 HSD17B12Q53GQ0 312 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 SYT6Q5T7P8 510 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-235ENST00000495515 TEX36Q5VZQ5 186 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 SFRP4Q6FHJ7 346 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-235ENST00000495515 DCDC5Q6ZRR9 648 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 SLC25A26Q70HW3 274 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 NLRC3Q7RTR2 1065 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 Q8IYB0 196 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 PNLDC1Q8NA58 520 aaKnown RBP14.34□□□□□ -0.11
HDAC6-235ENST00000495515 MAPK1IP1LQ8NDC0 245 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 OR51A2Q8NGJ7 313 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 SLITRK2Q9H156 845 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 ZNF665Q9H7R5 613 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 MIOXQ9UGB7 285 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 AKAP9Q99996 3911 aa14.34□□□□□ -0.11
HDAC6-235ENST00000495515 TANC2Q9HCD6 1990 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 CELSR1Q9NYQ6 3014 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 CHD3Q12873 2000 aaKnown RBP14.33□□□□□ -0.12
HDAC6-235ENST00000495515 WNT9BO14905 357 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 SC5DO75845 299 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 NXPH2O95156 264 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 PGA5P0DJD9 388 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 EGR1P18146 543 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 GALP22466 123 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 GMFBP60983 142 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 PDZK1IP1Q13113 114 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 SSX1Q16384 188 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 DDI2Q5TDH0 399 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 ASPHD2Q6ICH7 369 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 SATL1Q86VE3 508 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 FAM90A1Q86YD7 464 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 ZSCAN4Q8NAM6 433 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-235ENST00000495515 CEP19Q96LK0 163 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 NRIP2Q9BQI9 281 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 TMEM246Q9BRR3 403 aa14.33□□□□□ -0.12
HDAC6-235ENST00000495515 PATZ1Q9HBE1 687 aaKnown RBP14.33□□□□□ -0.12
HDAC6-235ENST00000495515 SF3B6Q9Y3B4 125 aaKnown RBP14.33□□□□□ -0.12
HDAC6-235ENST00000495515 TRAV8-7A0A075B6U6 113 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 CEACAM18A8MTB9 384 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 TRAPPC2LH3BP13 241 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 PIN1P1O15428 100 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 IGHV2-5P01817 119 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 UCHL1P09936 223 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 TMEM225BP0DP42 221 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 RPS2P15880 293 aaKnown RBP14.32□□□□□ -0.12
HDAC6-235ENST00000495515 ZNF93P35789 620 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-235ENST00000495515 RBMXP38159 391 aaKnown RBP14.32□□□□□ -0.12
HDAC6-235ENST00000495515 RIPPLY3P57055 190 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 LMO4P61968 165 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 BIVMQ86UB2 503 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 CDH26Q8IXH8 852 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 SAXO1Q8IYX7 474 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 NKAIN3Q8N8D7 197 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 C19orf18Q8NEA5 215 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 OR52N4Q8NGI2 321 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 OR51F2Q8NH61 342 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 MUL1Q969V5 352 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 RFT1Q96AA3 541 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 ORAI1Q96D31 301 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 SPACA5Q96QH8 159 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 RHOFQ9HBH0 211 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 NLKQ9UBE8 527 aa14.32□□□□□ -0.12
HDAC6-235ENST00000495515 C2CD3Q4AC94 2353 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms