RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 RSPO3Q9BXY4 272 aaPredicted RBP2.56□□□□□ -2
SMC4-224ENST00000494612 SLIRPQ9GZT3 109 aaKnown RBP2.56□□□□□ -2
SMC4-224ENST00000494612 STMN4Q9H169 189 aaPredicted RBP2.56□□□□□ -2
SMC4-224ENST00000494612 POMKQ9H5K3 350 aa2.56□□□□□ -2
SMC4-224ENST00000494612 C8orf33Q9H7E9 229 aaPredicted RBP2.56□□□□□ -2
SMC4-224ENST00000494612 TMEM27Q9HBJ8 222 aa2.56□□□□□ -2
SMC4-224ENST00000494612 LYRM4Q9HD34 91 aa2.56□□□□□ -2
SMC4-224ENST00000494612 MRPS30Q9NP92 439 aaKnown RBP2.56□□□□□ -2
SMC4-224ENST00000494612 MYOZ1Q9NP98 299 aaPredicted RBP2.56□□□□□ -2
SMC4-224ENST00000494612 PEF1Q9UBV8 284 aaKnown RBP2.56□□□□□ -2
SMC4-224ENST00000494612 CLN8Q9UBY8 286 aa2.56□□□□□ -2
SMC4-224ENST00000494612 CFAP45Q9UL16 551 aa2.56□□□□□ -2
SMC4-224ENST00000494612 RHBDD3Q9Y3P4 386 aa2.56□□□□□ -2
SMC4-224ENST00000494612 PLIN4Q96Q06 1357 aa2.56□□□□□ -2
SMC4-224ENST00000494612 CFAP47Q6ZTR5 3102 aa2.56□□□□□ -2
SMC4-224ENST00000494612 A0A0U1RQV1 116 aa2.55□□□□□ -2
SMC4-224ENST00000494612 M0QZ92 97 aa2.55□□□□□ -2
SMC4-224ENST00000494612 NDUFS8O00217 210 aa2.55□□□□□ -2
SMC4-224ENST00000494612 ZNF207O43670 478 aaKnown RBP2.55□□□□□ -2
SMC4-224ENST00000494612 REM1O75628 298 aa2.55□□□□□ -2
SMC4-224ENST00000494612 YIF1AO95070 293 aa2.55□□□□□ -2
SMC4-224ENST00000494612 FGFR1OPO95684 399 aaKnown RBP2.55□□□□□ -2
SMC4-224ENST00000494612 CTSLP07711 333 aa2.55□□□□□ -2
SMC4-224ENST00000494612 CISD3P0C7P0 127 aa2.55□□□□□ -2
SMC4-224ENST00000494612 UBCP0CG48 685 aaKnown RBP2.55□□□□□ -2
SMC4-224ENST00000494612 HSPD1P10809 573 aaKnown RBP2.55□□□□□ -2
SMC4-224ENST00000494612 CPN2P22792 545 aa2.55□□□□□ -2
SMC4-224ENST00000494612 CD52P31358 61 aa2.55□□□□□ -2
SMC4-224ENST00000494612 BMI1P35226 326 aa2.55□□□□□ -2
SMC4-224ENST00000494612 NDUFA8P51970 172 aa2.55□□□□□ -2
SMC4-224ENST00000494612 RPL23P62829 140 aaKnown RBP2.55□□□□□ -2
SMC4-224ENST00000494612 PITPNAQ00169 270 aa2.55□□□□□ -2
SMC4-224ENST00000494612 CDK5Q00535 292 aa2.55□□□□□ -2
SMC4-224ENST00000494612 GABRA6Q16445 453 aa2.55□□□□□ -2
SMC4-224ENST00000494612 LY6EQ16553 131 aa2.55□□□□□ -2
SMC4-224ENST00000494612 PGGHGQ32M88 737 aa2.55□□□□□ -2
SMC4-224ENST00000494612 HSP90AA4PQ58FG1 418 aa2.55□□□□□ -2
SMC4-224ENST00000494612 GCSAMLQ5JQS6 135 aa2.55□□□□□ -2
SMC4-224ENST00000494612 ZFP1Q6P2D0 407 aa2.55□□□□□ -2
SMC4-224ENST00000494612 LINC00523Q86TU6 105 aa2.55□□□□□ -2
SMC4-224ENST00000494612 CDKL3Q8IVW4 592 aaPredicted RBP2.55□□□□□ -2
SMC4-224ENST00000494612 ITPRIPQ8IWB1 547 aa2.55□□□□□ -2
SMC4-224ENST00000494612 H1FOOQ8IZA3 346 aaPredicted RBP2.55□□□□□ -2
SMC4-224ENST00000494612 PROKR2Q8NFJ6 384 aa2.55□□□□□ -2
SMC4-224ENST00000494612 OR6N1Q8NGY5 312 aa2.55□□□□□ -2
SMC4-224ENST00000494612 OR52P1PQ8NH57 321 aa2.55□□□□□ -2
SMC4-224ENST00000494612 CIRBP-AS1Q8TBR5 109 aa2.55□□□□□ -2
SMC4-224ENST00000494612 RGP1Q92546 391 aaPredicted RBP2.55□□□□□ -2
SMC4-224ENST00000494612 ESR2Q92731 530 aa2.55□□□□□ -2
SMC4-224ENST00000494612 OR10C1Q96KK4 312 aa2.55□□□□□ -2
SMC4-224ENST00000494612 SPIN2AQ99865 258 aa2.55□□□□□ -2
SMC4-224ENST00000494612 SPIN2BQ9BPZ2 258 aa2.55□□□□□ -2
SMC4-224ENST00000494612 FBXO6Q9NRD1 293 aaPredicted RBP2.55□□□□□ -2
SMC4-224ENST00000494612 MYEF2Q9P2K5 600 aaKnown RBP2.55□□□□□ -2
SMC4-224ENST00000494612 SLC17A7Q9P2U7 560 aa2.55□□□□□ -2
SMC4-224ENST00000494612 KMT2BQ9UMN6 2715 aaPredicted RBP2.55□□□□□ -2
SMC4-224ENST00000494612 STK38LQ9Y2H1 464 aa2.55□□□□□ -2
SMC4-224ENST00000494612 UBIAD1Q9Y5Z9 338 aa2.55□□□□□ -2
SMC4-224ENST00000494612 RFNGQ9Y644 331 aa2.55□□□□□ -2
SMC4-224ENST00000494612 COMMD3-BMI1R4GMX3 469 aa2.55□□□□□ -2
SMC4-224ENST00000494612 SPTBN4Q9H254 2564 aa2.55□□□□□ -2
SMC4-224ENST00000494612 ABCB11O95342 1321 aa2.54□□□□□ -2
SMC4-224ENST00000494612 NRCAMQ92823 1304 aa2.54□□□□□ -2
SMC4-224ENST00000494612 A0A0J9YXV3 536 aa2.54□□□□□ -2
SMC4-224ENST00000494612 LINC00854A0A1B0GVQ3 168 aa2.54□□□□□ -2
SMC4-224ENST00000494612 A0A1W2PQ67 120 aa2.54□□□□□ -2
SMC4-224ENST00000494612 TSPAN11A1L157 253 aa2.54□□□□□ -2
SMC4-224ENST00000494612 H7C0C1 242 aa2.54□□□□□ -2
SMC4-224ENST00000494612 ZNF701M0R085 212 aaPredicted RBP2.54□□□□□ -2
SMC4-224ENST00000494612 DNASE2O00115 360 aaPredicted RBP2.54□□□□□ -2
SMC4-224ENST00000494612 TRDMT1O14717 391 aaKnown RBP2.54□□□□□ -2
SMC4-224ENST00000494612 BET1O15155 118 aa2.54□□□□□ -2
SMC4-224ENST00000494612 CHMP2AO43633 222 aa2.54□□□□□ -2
SMC4-224ENST00000494612 AQP8O94778 261 aa2.54□□□□□ -2
SMC4-224ENST00000494612 SEMA3DO95025 777 aa2.54□□□□□ -2
SMC4-224ENST00000494612 TGM6O95932 706 aa2.54□□□□□ -2
SMC4-224ENST00000494612 DCNP07585 359 aaKnown RBP2.54□□□□□ -2
SMC4-224ENST00000494612 CCDC172P0C7W6 258 aa2.54□□□□□ -2
SMC4-224ENST00000494612 GOLGA8HP0CJ92 632 aa2.54□□□□□ -2
SMC4-224ENST00000494612 STAG3L2P0CL84 134 aa2.54□□□□□ -2
SMC4-224ENST00000494612 PTNP21246 168 aa2.54□□□□□ -2
SMC4-224ENST00000494612 MSR1P21757 451 aa2.54□□□□□ -2
SMC4-224ENST00000494612 USF1P22415 310 aaPredicted RBP2.54□□□□□ -2
SMC4-224ENST00000494612 OPRK1P41145 380 aa2.54□□□□□ -2
SMC4-224ENST00000494612 DAOAP59103 153 aa2.54□□□□□ -2
SMC4-224ENST00000494612 TAS2R31P59538 309 aa2.54□□□□□ -2
SMC4-224ENST00000494612 PIGHQ14442 188 aaPredicted RBP2.54□□□□□ -2
SMC4-224ENST00000494612 FBXO48Q5FWF7 155 aa2.54□□□□□ -2
SMC4-224ENST00000494612 AVPI1Q5T686 147 aa2.54□□□□□ -2
SMC4-224ENST00000494612 ZNF880Q6PDB4 577 aa2.54□□□□□ -2
SMC4-224ENST00000494612 HORMAD1Q86X24 394 aa2.54□□□□□ -2
SMC4-224ENST00000494612 ZNF547Q8IVP9 402 aa2.54□□□□□ -2
SMC4-224ENST00000494612 ZNF645Q8N7E2 425 aa2.54□□□□□ -2
SMC4-224ENST00000494612 ZNF615Q8N8J6 731 aa2.54□□□□□ -2
SMC4-224ENST00000494612 DNAJB3Q8WWF6 145 aa2.54□□□□□ -2
SMC4-224ENST00000494612 LRRC39Q96DD0 335 aa2.54□□□□□ -2
SMC4-224ENST00000494612 LINC00477Q96M19 166 aa2.54□□□□□ -2
SMC4-224ENST00000494612 RHOXF2Q9BQY4 288 aa2.54□□□□□ -2
SMC4-224ENST00000494612 IL22Q9GZX6 179 aa2.54□□□□□ -2
SMC4-224ENST00000494612 MED4Q9NPJ6 270 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms