RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 ZCCHC14Q8WYQ9 949 aaKnown RBP5.81□□□□□ -1.48
MSH5-217ENST00000494458 PIGCQ92535 297 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 UPRTQ96BW1 309 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 CMBLQ96DG6 245 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 BORCS8Q96FH0 119 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 MED30Q96HR3 178 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 NICN1Q9BSH3 213 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 URM1Q9BTM9 101 aaKnown RBP5.81□□□□□ -1.48
MSH5-217ENST00000494458 TMEM59Q9BXS4 323 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 PKIBQ9C010 78 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 ACTR6Q9GZN1 396 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 ALX4Q9H161 411 aaPredicted RBP5.81□□□□□ -1.48
MSH5-217ENST00000494458 METTL9Q9H1A3 318 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 TLNRD1Q9H1K6 362 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 OR51I2Q9H344 312 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 IFT22Q9H7X7 185 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 PCDHB16Q9NRJ7 776 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 SLC2A8Q9NY64 477 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 PTTG3PQ9NZH4 202 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 EIF3KQ9UBQ5 218 aaKnown RBP5.81□□□□□ -1.48
MSH5-217ENST00000494458 GPR160Q9UJ42 338 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 MEMO1Q9Y316 297 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 NOP16Q9Y3C1 178 aaKnown RBP5.81□□□□□ -1.48
MSH5-217ENST00000494458 NUBP2Q9Y5Y2 271 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 PIEZO2Q9H5I5 2752 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 MYO7BQ6PIF6 2116 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 IGLV3-9A0A075B6K5 115 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 FAM240BA0A1B0GVZ2 78 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 POM121CA8CG34 1229 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 CENPXA8MT69 81 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 SERPINE3A8MV23 424 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 ERVH48-1M5A8F1 160 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 AGFG2O95081 481 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 IGHV3-13P01766 116 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 TCRBP04435 133 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 GLAP06280 429 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 SFTPBP07988 381 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 CSF1P09603 554 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 GTF2F2P13984 249 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 TBPP20226 339 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 CCNOP22674 350 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 CPT2P23786 658 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 CHATP28329 748 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 CFHR2P36980 270 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 VEGFCP49767 419 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 ACTBP60709 375 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 GNG3P63215 75 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 ACTG1P63261 375 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 NAAAQ02083 359 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 GUCA2AQ02747 115 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 FAM27E3Q08E93 113 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 MADCAM1Q13477 382 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 SRSF7Q16629 238 aaKnown RBP eCLIP5.8□□□□□ -1.48
MSH5-217ENST00000494458 ZNF57Q68EA5 555 aaPredicted RBP5.8□□□□□ -1.48
MSH5-217ENST00000494458 PLET1Q6UQ28 207 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 Q6ZTK2 550 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 C11orf53Q8IXP5 236 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 OR8G5Q8NG78 346 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 SLC25A40Q8TBP6 338 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 KLF14Q8TD94 323 aaPredicted RBP5.8□□□□□ -1.48
MSH5-217ENST00000494458 GTF3AQ92664 365 aaKnown RBP5.8□□□□□ -1.48
MSH5-217ENST00000494458 GCDHQ92947 438 aaPredicted RBP5.8□□□□□ -1.48
MSH5-217ENST00000494458 PHF21AQ96BD5 680 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 S100PBPQ96BU1 408 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 RAB3CQ96E17 227 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 GPER1Q99527 375 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 CACNG6Q9BXT2 260 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 SELENOIQ9C0D9 397 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 OR2J1Q9GZK6 312 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 MMP28Q9H239 520 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 DPAGT1Q9H3H5 408 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 GHITMQ9H3K2 345 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 SEBOXQ9HB31 216 aaPredicted RBP5.8□□□□□ -1.48
MSH5-217ENST00000494458 CDH20Q9HBT6 801 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 MYOZ1Q9NP98 299 aaPredicted RBP5.8□□□□□ -1.48
MSH5-217ENST00000494458 MTCH1Q9NZJ7 389 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 RCC2Q9P258 522 aaKnown RBP5.8□□□□□ -1.48
MSH5-217ENST00000494458 NLKQ9UBE8 527 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 TINAGQ9UJW2 476 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 ELF5Q9UKW6 265 aaPredicted RBP5.8□□□□□ -1.48
MSH5-217ENST00000494458 ING4Q9UNL4 249 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 PLEKHA6Q9Y2H5 1048 aa5.8□□□□□ -1.48
MSH5-217ENST00000494458 FAM230AA0A1W2PPH8 454 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 A0A1W2PR80 420 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 MED19A0JLT2 244 aaPredicted RBP5.79□□□□□ -1.48
MSH5-217ENST00000494458 TMEM235A6NFC5 223 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 HMX3A6NHT5 357 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 TMEM210A6NLX4 147 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 ANKRD30BLA7E2S9 258 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 ZNF732B4DXR9 585 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 C16orf97H3BN30 126 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 CRTAPO75718 401 aaPredicted RBP5.79□□□□□ -1.48
MSH5-217ENST00000494458 NDUFB6O95139 128 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 MPIG6BO95866 241 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 THBDP07204 575 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 AKAIN1P0CW23 69 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 TMEM225BP0DP42 221 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 PPP3CBP16298 524 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 IL32P24001 234 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 GIFP27352 417 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms