RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 NEIL1Q96FI4 390 aaPredicted RBP11.3□□□□□ -0.6
COL1A1-208ENST00000494334 PKIBQ9C010 78 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 CCDC90BQ9GZT6 254 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 SNTG1Q9NSN8 517 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 HIF1ANQ9NWT6 349 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 TMEM160Q9NX00 188 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 CTSZQ9UBR2 303 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 HIVEP2P31629 2446 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 TLN2Q9Y4G6 2542 aa11.3□□□□□ -0.6
COL1A1-208ENST00000494334 ABCA2Q9BZC7 2435 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 MALRD1Q5VYJ5 2156 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 TRAV20A0A0B4J274 112 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 TRBV5-5A0A0J9YX44 114 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 KIAA1324LA8MWY0 1029 aaPredicted RBP11.29□□□□□ -0.6
COL1A1-208ENST00000494334 A8MXK9 166 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 PHF1O43189 567 aaPredicted RBP11.29□□□□□ -0.6
COL1A1-208ENST00000494334 NOS1APO75052 506 aaPredicted RBP11.29□□□□□ -0.6
COL1A1-208ENST00000494334 FOXH1O75593 365 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 ALX3O95076 343 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 OCM2P0CE71 109 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 PGA5P0DJD9 388 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 AMY2BP19961 511 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 PRKACBP22694 351 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 ATP1B3P54709 279 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 MTCP1P56278 107 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 LCN2P80188 198 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 IL24Q13007 206 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 MED22Q15528 200 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 ESCO2Q56NI9 601 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 YIF1BQ5BJH7 314 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 ASPHD2Q6ICH7 369 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 NLRC3Q7RTR2 1065 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 POC1AQ8NBT0 407 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 OR5T2Q8NGG2 359 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 OR8B3Q8NGG8 313 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 TMEM106AQ96A25 262 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 SPSB1Q96BD6 273 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 C12orf43Q96C57 262 aaKnown RBP11.29□□□□□ -0.6
COL1A1-208ENST00000494334 ZNF488Q96MN9 340 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 OPALINQ96PE5 141 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 OR8B2Q96RD0 313 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 KAAG1Q9UBP8 84 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 DNAJB11Q9UBS4 358 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 BLOC1S6Q9UL45 172 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 LRCH1Q9Y2L9 728 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 POLDIP2Q9Y2S7 368 aa11.29□□□□□ -0.6
COL1A1-208ENST00000494334 POLR3KQ9Y2Y1 108 aaPredicted RBP11.29□□□□□ -0.6
COL1A1-208ENST00000494334 TRAPPC2LH3BP13 241 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 ADAM20O43506 726 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 SULT1B1O43704 296 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 CD2P06729 351 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 ACAA1P09110 424 aaPredicted RBP11.28□□□□□ -0.6
COL1A1-208ENST00000494334 OCMP0CE72 109 aaPredicted RBP11.28□□□□□ -0.6
COL1A1-208ENST00000494334 EEF1B2P24534 225 aaKnown RBP11.28□□□□□ -0.6
COL1A1-208ENST00000494334 MAP2K4P45985 399 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 PITPNBP48739 271 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 ERVK11-1P61568 191 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 GNB2P62879 340 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 CR1LQ2VPA4 569 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 ATPAF1Q5TC12 328 aaPredicted RBP11.28□□□□□ -0.6
COL1A1-208ENST00000494334 WDR25Q64LD2 544 aaPredicted RBP11.28□□□□□ -0.6
COL1A1-208ENST00000494334 STUMQ69YW2 141 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 ZNF529Q6P280 563 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 CRIP3Q6Q6R5 217 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 LHFPL2Q6ZUX7 228 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 RNF144BQ7Z419 303 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 BATF2Q8N1L9 274 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 TMIGD2Q96BF3 282 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 CCL13Q99616 98 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 NRIP2Q9BQI9 281 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 SSBP3Q9BWW4 388 aaPredicted RBP11.28□□□□□ -0.6
COL1A1-208ENST00000494334 MMP26Q9NRE1 261 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 RASL12Q9NYN1 266 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 MTCH1Q9NZJ7 389 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 NLKQ9UBE8 527 aa11.28□□□□□ -0.6
COL1A1-208ENST00000494334 FN1P02751 2386 aaKnown RBP11.28□□□□□ -0.6
COL1A1-208ENST00000494334 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.27□□□□□ -0.6
COL1A1-208ENST00000494334 PPIAL4CA0A0B4J2A2 164 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 A0A1B0GW55 424 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 TMPRSS2O15393 492 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 CRLF1O75462 422 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 FCN3O75636 299 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 INMTO95050 263 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 PLATP00750 562 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 DUX4L2P0CJ85 424 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 DUX4L3P0CJ86 424 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 DUX4L4P0CJ87 422 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 DUX4L5P0CJ88 424 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 DUX4L6P0CJ89 424 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 DUX4L7P0CJ90 424 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 Q499Y3 187 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 FAM120AOSQ5T036 256 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 FAHD2BQ6P2I3 314 aaPredicted RBP11.27□□□□□ -0.61
COL1A1-208ENST00000494334 DUX4L9Q6RFH8 374 aaPredicted RBP11.27□□□□□ -0.61
COL1A1-208ENST00000494334 ACP7Q6ZNF0 438 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 SLC25A26Q70HW3 274 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 OR51A2Q8NGJ7 313 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 ANGPTL6Q8NI99 470 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 ORAI1Q96D31 301 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 FAHD2AQ96GK7 314 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms