RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 OR8B8Q15620 311 aa8.41□□□□□ -1.06
NPHP3-209ENST00000493732 RPUSD3Q6P087 351 aaKnown RBP8.41□□□□□ -1.06
NPHP3-209ENST00000493732 GALNT11Q8NCW6 608 aa8.41□□□□□ -1.06
NPHP3-209ENST00000493732 ROBO4Q8WZ75 1007 aa8.41□□□□□ -1.06
NPHP3-209ENST00000493732 SPSB4Q96A44 273 aa8.41□□□□□ -1.06
NPHP3-209ENST00000493732 ZNF837Q96EG3 531 aaPredicted RBP8.41□□□□□ -1.06
NPHP3-209ENST00000493732 PIK3IP1Q96FE7 263 aa8.41□□□□□ -1.06
NPHP3-209ENST00000493732 CCDC120Q96HB5 630 aa8.41□□□□□ -1.06
NPHP3-209ENST00000493732 THOC3Q96J01 351 aaKnown RBP8.41□□□□□ -1.06
NPHP3-209ENST00000493732 SPRY4Q9C004 299 aa8.41□□□□□ -1.06
NPHP3-209ENST00000493732 SHARPINQ9H0F6 387 aa8.41□□□□□ -1.06
NPHP3-209ENST00000493732 PIGMQ9H3S5 423 aa8.41□□□□□ -1.06
NPHP3-209ENST00000493732 RNF122Q9H9V4 155 aa8.41□□□□□ -1.06
NPHP3-209ENST00000493732 ZFP57Q9NU63 452 aa8.41□□□□□ -1.06
NPHP3-209ENST00000493732 ANXA10Q9UJ72 324 aa8.41□□□□□ -1.06
NPHP3-209ENST00000493732 KCNIP3Q9Y2W7 256 aa8.41□□□□□ -1.06
NPHP3-209ENST00000493732 NOSIPQ9Y314 301 aaKnown RBP8.41□□□□□ -1.06
NPHP3-209ENST00000493732 NCOA6Q14686 2063 aaPredicted RBP8.4□□□□□ -1.06
NPHP3-209ENST00000493732 KIAA1549Q9HCM3 1950 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 A0A0G2JMM0 328 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 A0A1W2PPB8 328 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 FAM230AA0A1W2PPH8 454 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 A0A1W2PRS3 328 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 FAM90A10PA6NDY2 464 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 FAM90A18PA6NE21 464 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 FAM90A16PA6NEW6 464 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 FAM90A20PA6NIJ5 464 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 FAM90A8PA6NJQ4 464 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 FAM90A7PA6NKC0 464 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 POM121CA8CG34 1229 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 FAM90A22PA8MWA6 464 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 KIR3DP1A8MWS1 328 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 FAM90A12PA8MX19 464 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 FAM90A5PA8MXJ8 464 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 FAM90A23PA8MXZ1 464 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 SYNGR4O95473 234 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 RFPL3SP0C7P2 107 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 FAM90A15PP0C7V4 464 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 FAM90A13PP0C7W8 464 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 FAM90A14PP0C7W9 464 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 FAM90A24PP0C7X0 464 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 ANOS1P23352 680 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 ACKR3P25106 362 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 CLDN15P56746 228 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 FOXO1Q12778 655 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 ATXN7L3Q14CW9 347 aaPredicted RBP8.4□□□□□ -1.06
NPHP3-209ENST00000493732 SLC9A3R2Q15599 337 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.4□□□□□ -1.06
NPHP3-209ENST00000493732 TIPARPQ7Z3E1 657 aaKnown RBP8.4□□□□□ -1.06
NPHP3-209ENST00000493732 OSR2Q8N2R0 312 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 DEFB123Q8N688 67 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 ZBTB44Q8NCP5 570 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 SLC30A7Q8NEW0 376 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 PSMF1Q92530 271 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 AQP10Q96PS8 301 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 ALKBH3Q96Q83 286 aaPredicted RBP8.4□□□□□ -1.06
NPHP3-209ENST00000493732 CMSS1Q9BQ75 279 aaKnown RBP8.4□□□□□ -1.06
NPHP3-209ENST00000493732 WNT5BQ9H1J7 359 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 PRDM6Q9NQX0 595 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 TAS2R3Q9NYW6 316 aa8.4□□□□□ -1.06
NPHP3-209ENST00000493732 hCG_38984A0A1B0GV85 526 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 RAB19A4D1S5 217 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 RPL36A-HNRNPH2H7BZ11 118 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 SDCBPO00560 298 aaPredicted RBP8.39□□□□□ -1.07
NPHP3-209ENST00000493732 OR5H8P0DN80 308 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 SUPT4H1P63272 117 aaKnown RBP8.39□□□□□ -1.07
NPHP3-209ENST00000493732 FAM3AP98173 230 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 AIMP2Q13155 320 aaKnown RBP8.39□□□□□ -1.07
NPHP3-209ENST00000493732 SMCO1Q147U7 214 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 TUSC1Q2TAM9 212 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 NKAPLQ5M9Q1 402 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 DHRS11Q6UWP2 260 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 C6orf201Q7Z4U5 140 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 DPPA2Q7Z7J5 298 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 BAP18Q8IXM2 172 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 OR2M7Q8NG81 312 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 OR2AE1Q8NHA4 323 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 RNF141Q8WVD5 230 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 ZNF775Q96BV0 537 aaPredicted RBP8.39□□□□□ -1.07
NPHP3-209ENST00000493732 ZNF2Q9BSG1 426 aaPredicted RBP8.39□□□□□ -1.07
NPHP3-209ENST00000493732 RNF126Q9BV68 326 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 C1QTNF5Q9BXJ0 243 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 OPA3Q9H6K4 179 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 DEPPQ9NTK1 212 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 MCTS1Q9ULC4 181 aaKnown RBP8.39□□□□□ -1.07
NPHP3-209ENST00000493732 ZNF724A8MTY0 619 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 TERTO14746 1132 aaKnown RBP8.39□□□□□ -1.07
NPHP3-209ENST00000493732 RPS2P15880 293 aaKnown RBP8.39□□□□□ -1.07
NPHP3-209ENST00000493732 GLRA1P23415 457 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 CHATP28329 748 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 MALLQ13021 153 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 PDZK1IP1Q13113 114 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 TMEM211Q6ICI0 200 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 SKA3Q8IX90 412 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 SAXO1Q8IYX7 474 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 AKR7LQ8NHP1 331 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 LINC00052Q96N35 136 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 SYT3Q9BQG1 590 aa8.39□□□□□ -1.07
NPHP3-209ENST00000493732 ZNF703Q9H7S9 590 aaPredicted RBP8.39□□□□□ -1.07
NPHP3-209ENST00000493732 ZNF286AQ9HBT8 521 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms