RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 SPON2Q9BUD6 331 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 MAP1LC3BQ9GZQ8 125 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 INPP5EQ9NRR6 644 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 SERGEFQ9UGK8 458 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 PILRBQ9UKJ0 227 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 TBL2Q9Y4P3 447 aaKnown RBP6.08□□□□□ -1.44
VPS13B-205ENST00000493587 CXorf51AA0A1B0GTR3 108 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 A0A1W2PQH9 124 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 ZFP92A6NM28 416 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 B4DEV8 164 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 MMP23AO75900 390 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 DANCRP0C864 163 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 CTSAP10619 480 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 CCL5P13501 91 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 HOXD9P28356 352 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-205ENST00000493587 EFNB2P52799 333 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 SLC25A1P53007 311 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 NTHL1P78549 312 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 FAM3AP98173 230 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 BAXQ07812 192 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 FUT5Q11128 374 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 NFATC2Q13469 925 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 RAB30Q15771 203 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 IAH1Q2TAA2 248 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-205ENST00000493587 MS4A13Q5J8X5 152 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 STPG1Q5TH74 334 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 GLB1LQ6UWU2 654 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 STAC2Q6ZMT1 411 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 ATG4DQ86TL0 474 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-205ENST00000493587 NOXO1Q8NFA2 376 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 OR6K6Q8NGW6 343 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 OR2AE1Q8NHA4 323 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 MARCH1Q8TCQ1 289 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 FAM222BQ8WU58 562 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 KLK6Q92876 244 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 ATP5SQ99766 215 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 AK3Q9UIJ7 227 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 SIGLEC7Q9Y286 467 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 DOCK6Q96HP0 2047 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 FAM230AA0A1W2PPH8 454 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 CLEC18AA5D8T8 446 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 DIRC3C9JPN6 131 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 ONECUT2O95948 504 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 HMGA1P17096 107 aaKnown RBP6.08□□□□□ -1.44
VPS13B-205ENST00000493587 AZU1P20160 251 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 PCBP3P57721 371 aaKnown RBP6.08□□□□□ -1.44
VPS13B-205ENST00000493587 TMEM267Q0VDI3 215 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-205ENST00000493587 RUNX2Q13950 521 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 SHHQ15465 462 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 PLXDC2Q6UX71 529 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 DPY19L4Q7Z388 723 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 RTN4RL2Q86UN3 420 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 SGPP2Q8IWX5 399 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 D2HGDHQ8N465 521 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 CLEC18CQ8NCF0 446 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 MS4A6EQ96DS6 147 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 PRRC1Q96M27 445 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 DEFB118Q96PH6 123 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 HIF1ANQ9NWT6 349 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 PLA2G2EQ9NZK7 142 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 SS18L2Q9UHA2 77 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 MYO9BQ13459 2157 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 TRBV24-1A0A075B6N3 115 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 NPIPA5A0A0B4J1W7 369 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 A0A1B0GVT2 93 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 CTAG2O75638 210 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 GJB5O95377 273 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 SRP19P09132 144 aaKnown RBP6.07□□□□□ -1.44
VPS13B-205ENST00000493587 ZNF20P17024 532 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 AK4P27144 223 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-205ENST00000493587 GALR1P47211 349 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 LGALS7P47929 136 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 CSNK1A1P48729 337 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 GFRA1P56159 465 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 CLDN6P56747 220 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 FZD2Q14332 565 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 ASPHD2Q6ICH7 369 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 SLC8B1Q6J4K2 584 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 RPL22L1Q6P5R6 122 aaKnown RBP6.07□□□□□ -1.44
VPS13B-205ENST00000493587 FAM151BQ6UXP7 276 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 BAGE3Q86Y29 109 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 BAGE2Q86Y30 109 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 ZNF676Q8N7Q3 588 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 TMEM229BQ8NBD8 167 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 OR2G3Q8NGZ4 309 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 OR4S2Q8NH73 311 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 KCNE4Q8WWG9 221 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 ASB10Q8WXI3 467 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 PELI1Q96FA3 418 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 C2orf50Q96LR7 162 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 MAGT1Q9H0U3 335 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 SH3BGRL3Q9H299 93 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 P4HTMQ9NXG6 502 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 GNG13Q9P2W3 67 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 CRLS1Q9UJA2 301 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 OR5B21A6NL26 309 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 GALR2O43603 387 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-205ENST00000493587 RAMP3O60896 148 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 SLC16A8O95907 504 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 181.3 ms