RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 ADRA2CP18825 462 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 ZNF93P35789 620 aaPredicted RBP11.36□□□□□ -0.59
MSH6-208ENST00000493177 POU3F4P49335 361 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 PCGF3Q3KNV8 242 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 PRAMEF6Q5VXH4 476 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 TPRA1Q86W33 373 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 ITLN1Q8WWA0 313 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 NEU4Q8WWR8 484 aaPredicted RBP11.36□□□□□ -0.59
MSH6-208ENST00000493177 MEGF10Q96KG7 1140 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 OR2V2Q96R30 315 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 NKX3-1Q99801 234 aaPredicted RBP11.36□□□□□ -0.59
MSH6-208ENST00000493177 EGLN1Q9GZT9 426 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 FAM192AQ9GZU8 254 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 FGF23Q9GZV9 251 aaPredicted RBP11.36□□□□□ -0.59
MSH6-208ENST00000493177 DCSTAMPQ9H295 470 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 VPS13CQ709C8 3753 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 PQLC2LA1A4F0 135 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 A6NHS1 94 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 A6NLC8 198 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 CD5LO43866 347 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 DAOP14920 347 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 USF1P22415 310 aaPredicted RBP11.35□□□□□ -0.59
MSH6-208ENST00000493177 CD200P41217 278 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 HAAOP46952 286 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 PSMD7P51665 324 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 CAV3P56539 151 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 OR10A3P58181 314 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 CCL8P80075 99 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 MAB21L1Q13394 359 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 SPCS2Q15005 226 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 KISS1Q15726 138 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 FAM209AQ5JX71 171 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 ANGPTL5Q86XS5 388 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 ZNF573Q86YE8 665 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 PNLDC1Q8NA58 520 aaKnown RBP11.35□□□□□ -0.59
MSH6-208ENST00000493177 OR5D18Q8NGL1 313 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 FOXRED1Q96CU9 486 aaPredicted RBP11.35□□□□□ -0.59
MSH6-208ENST00000493177 DGCR14Q96DF8 476 aaKnown RBP11.35□□□□□ -0.59
MSH6-208ENST00000493177 SAP30LQ9HAJ7 183 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 PLGRKTQ9HBL7 147 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 UFSP2Q9NUQ7 469 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 IL19Q9UHD0 177 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 V9GY05 133 aa11.35□□□□□ -0.59
MSH6-208ENST00000493177 YLPM1P49750 1951 aaKnown RBP11.34□□□□□ -0.59
MSH6-208ENST00000493177 IGKV1-27A0A075B6S5 117 aa11.34□□□□□ -0.59
MSH6-208ENST00000493177 LOC100289279A0A1B0GTE1 492 aa11.34□□□□□ -0.59
MSH6-208ENST00000493177 A0A1B0GWJ7 208 aa11.34□□□□□ -0.59
MSH6-208ENST00000493177 LRP5LA4QPB2 252 aa11.34□□□□□ -0.59
MSH6-208ENST00000493177 ZNF701M0R085 212 aaPredicted RBP11.34□□□□□ -0.59
MSH6-208ENST00000493177 IL1AP01583 271 aa11.34□□□□□ -0.59
MSH6-208ENST00000493177 CD55P08174 381 aa11.34□□□□□ -0.59
MSH6-208ENST00000493177 TMEM225BP0DP42 221 aa11.34□□□□□ -0.59
MSH6-208ENST00000493177 TNFRSF1AP19438 455 aa11.34□□□□□ -0.59
MSH6-208ENST00000493177 RPS19P39019 145 aaKnown RBP11.34□□□□□ -0.59
MSH6-208ENST00000493177 LOXL1Q08397 574 aaPredicted RBP11.34□□□□□ -0.59
MSH6-208ENST00000493177 HNRNPA0Q13151 305 aaKnown RBP11.34□□□□□ -0.59
MSH6-208ENST00000493177 TMEM249Q2WGJ8 235 aa11.34□□□□□ -0.59
MSH6-208ENST00000493177 HES5Q5TA89 166 aa11.34□□□□□ -0.59
MSH6-208ENST00000493177 FOXB2Q5VYV0 432 aa11.34□□□□□ -0.59
MSH6-208ENST00000493177 HAGHLQ6PII5 290 aaPredicted RBP11.34□□□□□ -0.59
MSH6-208ENST00000493177 RNF144BQ7Z419 303 aa11.34□□□□□ -0.59
MSH6-208ENST00000493177 WDR86Q86TI4 376 aa11.34□□□□□ -0.59
MSH6-208ENST00000493177 TNFAIP8L1Q8WVP5 186 aa11.34□□□□□ -0.59
MSH6-208ENST00000493177 S100A13Q99584 98 aa11.34□□□□□ -0.59
MSH6-208ENST00000493177 GFI1Q99684 422 aa11.34□□□□□ -0.59
MSH6-208ENST00000493177 METTL17Q9H7H0 456 aaPredicted RBP11.34□□□□□ -0.59
MSH6-208ENST00000493177 ELL3Q9HB65 397 aaPredicted RBP11.34□□□□□ -0.59
MSH6-208ENST00000493177 hCG_1807616A0A1W2PRN6 198 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 NOTOA8MTQ0 251 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 A8MV72 311 aaPredicted RBP11.33□□□□□ -0.6
MSH6-208ENST00000493177 SPRY1O43609 319 aaPredicted RBP11.33□□□□□ -0.6
MSH6-208ENST00000493177 CYB5AP00167 134 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 ADH4P08319 380 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 NR4A2P43354 598 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 OR3A4PP47883 348 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 ZNF154Q13106 437 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 RAB11BQ15907 218 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 SPRNQ5BIV9 151 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 IDNKQ5T6J7 187 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 CYB5R2Q6BCY4 276 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 AWAT2Q6E213 333 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 SFXN4Q6P4A7 337 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 MOGAT3Q86VF5 341 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 CDH26Q8IXH8 852 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 CELF2-AS1Q8N7Q2 184 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 SCCPDHQ8NBX0 429 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 UQCC2Q9BRT2 126 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 OR51I2Q9H344 312 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 CNTD2Q9H8S5 307 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 FN3KRPQ9HA64 309 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 C1orf123Q9NWV4 160 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 TREM2Q9NZC2 230 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 DAPK2Q9UIK4 370 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 ING4Q9UNL4 249 aa11.33□□□□□ -0.6
MSH6-208ENST00000493177 MRPS28Q9Y2Q9 187 aaKnown RBP11.33□□□□□ -0.6
MSH6-208ENST00000493177 J3QT63 122 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 CDIPTO14735 213 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 ANGPTL7O43827 346 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 HPXP02790 462 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 IRF2P14316 349 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms