RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 ARAFP10398 606 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 PNMTP11086 282 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 ZNF14P17017 642 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-213ENST00000492506 ADRA2CP18825 462 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 CHI3L1P36222 383 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-213ENST00000492506 CDKN2CP42773 168 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 CAPZA1P52907 286 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 SPCS3P61009 180 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 SLC36A2Q495M3 483 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 PHYHD1Q5SRE7 291 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 ZNF770Q6IQ21 691 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-213ENST00000492506 LRRN1Q6UXK5 716 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 GLDNQ6ZMI3 551 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-213ENST00000492506 ZNF621Q6ZSS3 439 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 TEX29Q8N6K0 151 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 C15orf54Q8N8G6 183 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 ZNF565Q8N9K5 539 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 BPIFCQ8NFQ6 507 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 BEST4Q8NFU0 473 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 PCNPQ8WW12 178 aaKnown RBP11.18□□□□□ -0.62
HDAC3-213ENST00000492506 SYT3Q9BQG1 590 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 SLC35A5Q9BS91 424 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 MRI1Q9BV20 369 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 ARL6Q9H0F7 186 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 TMPRSS5Q9H3S3 457 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 MTHFD2LQ9H903 347 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-213ENST00000492506 SLC6A13Q9NSD5 602 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 DNAJC27Q9NZQ0 273 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 A0A0G2JK05 382 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 C5orf52A6NGY3 159 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 PLPP2O43688 288 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 KHDRBS3O75525 346 aaKnown RBP11.17□□□□□ -0.62
HDAC3-213ENST00000492506 HLA-HP01893 362 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 DBIP07108 87 aaKnown RBP11.17□□□□□ -0.62
HDAC3-213ENST00000492506 SLC2A1P11166 492 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 TAS2R43P59537 309 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 EGR4Q05215 589 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 FOXL1Q12952 345 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 KLF9Q13886 244 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-213ENST00000492506 RGNQ15493 299 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 OLFML2AQ68BL7 652 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 ZNF626Q68DY1 528 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 ZNF660Q6AZW8 331 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-213ENST00000492506 WBP2NLQ6ICG8 309 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 ALKAL2Q6UX46 152 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 TREML4Q6UXN2 200 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 TMEM91Q6ZNR0 172 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 ZNF440Q8IYI8 595 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 TMEM123Q8N131 208 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 C10orf111Q8N326 155 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 ZNF561Q8N587 486 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 OR9Q2Q8NGE9 314 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 OR10K1Q8NGX5 313 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 MFSD8Q8NHS3 518 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 THAP6Q8TBB0 222 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 SMIM4Q8WVI0 70 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 TMEM68Q96MH6 324 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 EGLN1Q9GZT9 426 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 ZNF665Q9H7R5 613 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 PIPOXQ9P0Z9 390 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 CHST2Q9Y4C5 530 aa11.17□□□□□ -0.62
HDAC3-213ENST00000492506 MPZL1O95297 269 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 SPP1P10451 314 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 PRG2P13727 222 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 ZNF43P17038 809 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 FAUP35544 74 aaKnown RBP11.16□□□□□ -0.62
HDAC3-213ENST00000492506 RAB5CP51148 216 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 HCCSP53701 268 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 ZNF345Q14585 488 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 ACSM5Q6NUN0 579 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 ZNF836Q6ZNA1 936 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 TSEN54Q7Z6J9 526 aaKnown RBP11.16□□□□□ -0.62
HDAC3-213ENST00000492506 VRK2Q86Y07 508 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 STK35Q8TDR2 534 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 DVL3Q92997 716 aaPredicted RBP11.16□□□□□ -0.62
HDAC3-213ENST00000492506 ZNF582Q96NG8 517 aaPredicted RBP11.16□□□□□ -0.62
HDAC3-213ENST00000492506 MOGAT1Q96PD6 335 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 SEC11CQ9BY50 192 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 POLR2J3Q9H1A7 115 aaKnown RBP11.16□□□□□ -0.62
HDAC3-213ENST00000492506 SMCO4Q9NRQ5 59 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 INPP5EQ9NRR6 644 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 OPN4Q9UHM6 478 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 FZR1Q9UM11 496 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 TANC2Q9HCD6 1990 aa11.16□□□□□ -0.62
HDAC3-213ENST00000492506 WNK1Q9H4A3 2382 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 J3QLI3 93 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 TRAF3IP2O43734 574 aaPredicted RBP11.15□□□□□ -0.62
HDAC3-213ENST00000492506 OR2F2O95006 317 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 SELLP14151 372 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 MAGEB1P43366 347 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 TAS2R60P59551 318 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 RAB2AP61019 212 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 SLC3A1Q07837 685 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 OR2F1Q13607 317 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 SCARB2Q14108 478 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 PEA15Q15121 130 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 HMGN3Q15651 99 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 ZNF311Q5JNZ3 666 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 COX20Q5RI15 118 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 IDNKQ5T6J7 187 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms