RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 CGGBP1Q9UFW8 167 aaPredicted RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 REV3LO60673 3130 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 A0A0B4J2A0 478 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF850A8MQ14 1090 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 HSBP1L1C9JCN9 74 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 HAX1O00165 279 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 ATG12O94817 140 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 NXPH2O95156 264 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 KNG1P01042 644 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 HOXD4P09016 255 aaPredicted RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 IFI6P09912 130 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 HOXB9P17482 250 aaPredicted RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 CA6P23280 308 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 CCR6P51684 374 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 RPS25P62851 125 aaKnown RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 EDDM3AQ14507 147 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 YIF1BQ5BJH7 314 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 ZBTB37Q5TC79 503 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 OR10K2Q6IF99 312 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 CFAP161Q6P656 301 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 TSEN54Q7Z6J9 526 aaKnown RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 SIAH3Q8IW03 269 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 OR10AD1Q8NGE0 317 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 SYNPRQ8TBG9 265 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 GLYATL2Q8WU03 294 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 RAB39BQ96DA2 213 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 CMBLQ96DG6 245 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 PTDSS2Q9BVG9 487 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 GABARAPL3Q9BY60 117 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 PLK3Q9H4B4 646 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 TMEM38BQ9NVV0 291 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 SHPKQ9UHJ6 478 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 LRP12Q9Y561 859 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 MEGF11A6BM72 1044 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 PTP4A3O75365 173 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 NCR1O76036 304 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 HLA-AP01891 365 aaKnown RBP3.92□□□□□ -1.78
TRA2B-215ENST00000492417 SCG5P05408 212 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 CDK2P24941 298 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 DUSP1P28562 367 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 ATP1B3P54709 279 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 EDDM3BP56851 147 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 OR2B8PP59922 312 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 SNRPGP62308 76 aaKnown RBP3.92□□□□□ -1.78
TRA2B-215ENST00000492417 HLXQ14774 488 aaPredicted RBP3.92□□□□□ -1.78
TRA2B-215ENST00000492417 RBMS2Q15434 407 aaKnown RBP3.92□□□□□ -1.78
TRA2B-215ENST00000492417 PDZD11Q5EBL8 140 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 RPL22L1Q6P5R6 122 aaKnown RBP3.92□□□□□ -1.78
TRA2B-215ENST00000492417 TMEM81Q6P7N7 255 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 CLEC9AQ6UXN8 241 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 TMUB2Q71RG4 321 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 TPRA1Q86W33 373 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 DNAAF1Q8NEP3 725 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 SEMA6DQ8NFY4 1073 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 OR11L1Q8NGX0 322 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 OTOSQ8NHW6 89 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 SLAMF9Q96A28 289 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 SEC22CQ9BRL7 303 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 EGLN1Q9GZT9 426 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 PBOV1Q9GZY1 135 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 GABARAPL1Q9H0R8 117 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 NCOR1P1Q9H4R4 102 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 DUSP21Q9H596 190 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 RNF167Q9H6Y7 350 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 NOX4Q9NPH5 578 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 TAAR3PQ9P1P4 343 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF281Q9Y2X9 895 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 UBE2J1Q9Y385 318 aaPredicted RBP3.92□□□□□ -1.78
TRA2B-215ENST00000492417 V9GY05 133 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 HIVEP3Q5T1R4 2406 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 A0A087WV48 116 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 IGKV1D-43A0A0B4J1Z2 117 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 A0A0U1RQK1 487 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 TRAPPC2LH3BP13 241 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 MSTNO14793 375 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 PHOX2AO14813 284 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 DNPH1O43598 174 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 SNRPBP14678 240 aaKnown RBP3.92□□□□□ -1.78
TRA2B-215ENST00000492417 NDUFB7P17568 137 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 COL8A1P27658 744 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 GABRA5P31644 462 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 PPP1CBP62140 327 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 CCL8P80075 99 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 GPR50Q13585 617 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 GPR176Q14439 515 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 PDCD1Q15116 288 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 BCL2A1Q16548 175 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 FAM209AQ5JX71 171 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 FAM27D1Q5T7N8 215 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 SLC38A6Q8IZM9 456 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 BPIFB2Q8N4F0 458 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF561Q8N587 486 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 OR4D10Q8NGI6 311 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 OR51T1Q8NGJ9 327 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 OR5H2Q8NGV7 314 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 OR6F1Q8NGZ6 308 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 RAB40AQ8WXH6 277 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 TXN2Q99757 166 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 SFXN3Q9BWM7 321 aa3.92□□□□□ -1.78
TRA2B-215ENST00000492417 OR2J1Q9GZK6 312 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms