RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 ATRAIDQ6UW56 229 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 FOXL2NBQ6ZUU3 175 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 HIST2H3AQ71DI3 136 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 KCNRGQ8N5I3 272 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 PIGCQ92535 297 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 NARS2Q96I59 477 aaKnown RBP10.82□□□□□ -0.68
HMGN1-220ENST00000492280 ADGRG7Q96K78 797 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 DHRS9Q9BPW9 319 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 ZNF2Q9BSG1 426 aaPredicted RBP10.82□□□□□ -0.68
HMGN1-220ENST00000492280 WNT5BQ9H1J7 359 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 MYOZ1Q9NP98 299 aaPredicted RBP10.82□□□□□ -0.68
HMGN1-220ENST00000492280 OR2S2Q9NQN1 319 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 IL17BQ9UHF5 180 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 TSPAN4O14817 238 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 BCL2L11O43521 198 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 NR2C1P13056 603 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 ITGA3P26006 1051 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 MAGEA5P43359 124 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 FOXO1Q12778 655 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 RAB35Q15286 201 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 CLEC9AQ6UXN8 241 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 ZBTB44Q8NCP5 570 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 CPEB3Q8NE35 698 aaKnown RBP10.82□□□□□ -0.68
HMGN1-220ENST00000492280 FNDC9Q8TBE3 224 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 WNT2BQ93097 391 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 CDC6Q99741 560 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 SULT4A1Q9BR01 284 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 METTL8Q9H825 291 aaKnown RBP10.82□□□□□ -0.68
HMGN1-220ENST00000492280 AK3Q9UIJ7 227 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 ARPC4-TTLL3A0A0A6YYG9 625 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 FIGNL2A6NMB9 653 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 DBX1A6NMT0 343 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 HSPB6O14558 160 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 SCGNO76038 276 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 HLA-HP01893 362 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 CSTBP04080 98 aaKnown RBP10.81□□□□□ -0.68
HMGN1-220ENST00000492280 EDN3P14138 238 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 CPT2P23786 658 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 CTSSP25774 331 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 NOVA1P51513 510 aaKnown RBP10.81□□□□□ -0.68
HMGN1-220ENST00000492280 SP6Q3SY56 376 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 PABPC1L2AQ5JQF8 200 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 DHRS13Q6UX07 377 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 CALHM1Q8IU99 346 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 FAM89BQ8N5H3 189 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 PP6455Q8WZ26 134 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 OTOGLQ3ZCN5 2332 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 NEURL1O76050 574 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 HPP00738 406 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 APOC3P02656 99 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 FKBP2P26885 142 aaKnown RBP10.81□□□□□ -0.68
HMGN1-220ENST00000492280 PSMB6P28072 239 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 HOXD11P31277 338 aaPredicted RBP10.81□□□□□ -0.68
HMGN1-220ENST00000492280 RAB32Q13637 225 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 VAX1Q5SQQ9 334 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 ACOT7LQ6ZUV0 252 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 FBXL14Q8N1E6 418 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 BORCS8Q96FH0 119 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 Q96M66 194 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 HS3ST6Q96QI5 342 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 OCSTAMPQ9BR26 566 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 OR2H1Q9GZK4 316 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 GPR35Q9HC97 309 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 SLC7A10Q9NS82 523 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 IL36RNQ9UBH0 155 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 OSGIN2Q9Y236 505 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 ATMQ13315 3056 aa10.81□□□□□ -0.68
HMGN1-220ENST00000492280 MTRF1O75570 445 aaKnown RBP10.8□□□□□ -0.68
HMGN1-220ENST00000492280 SFT2D2O95562 160 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 ACP1P24666 158 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 AGTR1P30556 359 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 NPBWR2P48146 333 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 ZNF133P52736 654 aaPredicted RBP10.8□□□□□ -0.68
HMGN1-220ENST00000492280 PLCXD3Q63HM9 321 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 TUSC5Q8IXB3 177 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 ARRDC1Q8N5I2 433 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 INO80EQ8NBZ0 244 aaPredicted RBP10.8□□□□□ -0.68
HMGN1-220ENST00000492280 BVESQ8NE79 360 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 PXT1Q8NFP0 134 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 OR5AP2Q8NGF4 316 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 EMG1Q92979 244 aaKnown RBP10.8□□□□□ -0.68
HMGN1-220ENST00000492280 NTNG2Q96CW9 530 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 GPHA2Q96T91 129 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 RNF126Q9BV68 326 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 ASF1BQ9NVP2 202 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 ANAPC10Q9UM13 185 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 GJE1A6NN92 205 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 UBBP0CG47 229 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 RPS2P15880 293 aaKnown RBP10.8□□□□□ -0.68
HMGN1-220ENST00000492280 NAT1P18440 290 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 ZP3P21754 424 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 FPR2P25090 351 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 MPZP25189 248 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 GSK3AP49840 483 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 UBA52P62987 128 aaKnown RBP10.8□□□□□ -0.68
HMGN1-220ENST00000492280 FGL1Q08830 312 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 RIPPLY1Q0D2K3 151 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 ABLIM2Q6H8Q1 611 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 LPCAT3Q6P1A2 487 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 Q6ZPA2 131 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms