RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 SLC35G3Q8N808 338 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 ZNF552Q9H707 407 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 A0A1W2PPV4 95 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 NFAM1Q8NET5 270 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 ZPLD1Q8TCW7 415 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 YIPF6Q96EC8 236 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 EIF5A2Q9GZV4 153 aaKnown RBP12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 ZNF703Q9H7S9 590 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 PARD6AQ9NPB6 346 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 TSPAN9O75954 239 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 SRP14P37108 136 aaKnown RBP12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 RAP2BP61225 183 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 LY6DQ14210 128 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 METTL17Q9H7H0 456 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 PSG4Q00888 419 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 FOXO1Q12778 655 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 RTP5Q14D33 572 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 RTL8BQ17RB0 113 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 BRICD5Q6PL45 260 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 SKA3Q8IX90 412 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 OR10AC1Q8NH08 325 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 SLC39A7Q92504 469 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 STARD10Q9Y365 291 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 DSPPQ9NZW4 1301 aa12.63□□□□□ -0.39
ARHGEF39-205ENST00000490638 I3L521 148 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 SPDEFO95238 335 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 CD3DP04234 171 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 EIF4EP06730 217 aaKnown RBP12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 AKR1C1Q04828 323 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 RIPPLY2Q5TAB7 128 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 XAF1Q6GPH4 301 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 ZGRF1Q86YA3 2104 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 NYNRINQ9P2P1 1898 aaKnown RBP12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 OR4C45A6NMZ5 311 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 SHOXO15266 292 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 MED6O75586 246 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 PTBP1P26599 531 aaKnown RBP eCLIP12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 BEX5Q5H9J7 111 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 MOB3BQ86TA1 216 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 SLC7A5P1Q8MH63 180 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 SSUH2Q9Y2M2 353 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 hADV38S2A0JD32 116 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 K7EPK0 472 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 HRH1P35367 487 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 NKX2-5P52952 324 aaPredicted RBP12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 RHOUQ7L0Q8 258 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 S100A7AQ86SG5 101 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 FAM71E2Q8N5Q1 922 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 APH1BQ8WW43 257 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 BRCA2P51587 3418 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 DCTN6O00399 190 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 YIF1AO95070 293 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 RPS4Y1P22090 263 aaKnown RBP12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 COX7A1P24310 79 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 GNB1P62873 340 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 HLXQ14774 488 aaPredicted RBP12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 SPAG16Q8N0X2 631 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 NMNAT2Q9BZQ4 307 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 COMMD5Q9GZQ3 224 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 CISD1Q9NZ45 108 aaKnown RBP12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 FRRS1LQ9P0K9 344 aa12.62□□□□□ -0.39
ARHGEF39-205ENST00000490638 PRSS44E7EML9 344 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 KITLGP21583 273 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 CD79BP40259 229 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 RAB11AP62491 216 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 SORDQ00796 357 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 Q6ZNX1 250 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 ARHGAP5-AS1Q96IT6 56 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 SFXN3Q9BWM7 321 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 HEATR1Q9H583 2144 aaKnown RBP12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 A1L4Q6 167 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 MS4A18H0YCH9 400 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 ZNHIT1O43257 154 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 XRCC3O43542 346 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 TRAF3IP2O43734 574 aaPredicted RBP12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 PDCD6O75340 191 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 S100A6P06703 90 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 COL19A1Q14993 1142 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 MS4A18Q3C1V0 323 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 OR5H6Q8NGV6 325 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 KCNMB2Q9Y691 235 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 TRIM64CA6NLI5 447 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 NXPH3O95157 252 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 OR3A4PP47883 348 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 KRBOX4Q5JUW0 171 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 DMKNQ6E0U4 476 aaPredicted RBP12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 OR10V1Q8NGI7 309 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 ZNF251Q9BRH9 671 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 SEC22CQ9BRL7 303 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 FAAP24Q9BTP7 215 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 SRXN1Q9BYN0 137 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 PIGMQ9H3S5 423 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 DLL4Q9NR61 685 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 RNF7Q9UBF6 113 aa12.61□□□□□ -0.39
ARHGEF39-205ENST00000490638 A0A1W2PRD5 423 aa12.6□□□□□ -0.39
ARHGEF39-205ENST00000490638 A0A1W2PRF3 423 aa12.6□□□□□ -0.39
ARHGEF39-205ENST00000490638 A0A1W2PRM7 423 aa12.6□□□□□ -0.39
ARHGEF39-205ENST00000490638 FAAP20Q6NZ36 180 aa12.6□□□□□ -0.39
ARHGEF39-205ENST00000490638 LINC00299Q6ZSB3 139 aa12.6□□□□□ -0.39
ARHGEF39-205ENST00000490638 NOXA1Q86UR1 476 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms