RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 C8orf33Q9H7E9 229 aaPredicted RBP1.42□□□□□ -2.18
PTPN4-212ENST00000488896 ZC4H2Q9NQZ6 224 aa1.42□□□□□ -2.18
PTPN4-212ENST00000488896 TUBG2Q9NRH3 451 aa1.42□□□□□ -2.18
PTPN4-212ENST00000488896 STX18Q9P2W9 335 aaKnown RBP1.42□□□□□ -2.18
PTPN4-212ENST00000488896 DDX19BQ9UMR2 479 aa1.42□□□□□ -2.18
PTPN4-212ENST00000488896 VWDEQ8N2E2 1590 aa1.42□□□□□ -2.18
PTPN4-212ENST00000488896 MIA3Q5JRA6 1907 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 H3BN98 237 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 H3BQ85 93 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 TRDMT1O14717 391 aaKnown RBP1.41□□□□□ -2.18
PTPN4-212ENST00000488896 AKR7A2O43488 359 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 PTTG1O95997 202 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 RGS6P49758 472 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 LGALSLQ3ZCW2 172 aaPredicted RBP1.41□□□□□ -2.18
PTPN4-212ENST00000488896 TCF24Q7RTU0 167 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 DAW1Q8N136 415 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 ZFP62Q8NB50 900 aaPredicted RBP1.41□□□□□ -2.18
PTPN4-212ENST00000488896 OR2M7Q8NG81 312 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 OR1S1Q8NH92 325 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 GLYATL2Q8WU03 294 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 ITLN2Q8WWU7 325 aaPredicted RBP1.41□□□□□ -2.18
PTPN4-212ENST00000488896 DERL3Q96Q80 235 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 NAPGQ99747 312 aaPredicted RBP1.41□□□□□ -2.18
PTPN4-212ENST00000488896 TBL1XR1Q9BZK7 514 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 OR2AG1Q9H205 316 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 FANCEQ9HB96 536 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 ZNF337Q9Y3M9 751 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 DYSFO75923 2080 aa1.41□□□□□ -2.18
PTPN4-212ENST00000488896 LTBP2Q14767 1821 aa1.4□□□□□ -2.18
PTPN4-212ENST00000488896 HACD1B0YJ81 288 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 MYL12BO14950 172 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 ENTPD6O75354 484 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 HSBP1O75506 76 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 UPK1BO75841 260 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 ZNF708P17019 499 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 GABRR2P28476 465 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 MAGEA1P43355 309 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 CLDN6P56747 220 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 RPL18AQ02543 176 aaKnown RBP1.4□□□□□ -2.19
PTPN4-212ENST00000488896 PLCXD3Q63HM9 321 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 GPX8Q8TED1 209 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 TMEM234Q8WY98 164 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 OR5P3Q8WZ94 311 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 NAT6Q93015 286 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 ISG20Q96AZ6 181 aaKnown RBP1.4□□□□□ -2.19
PTPN4-212ENST00000488896 Q96MT0 163 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 C20orf166-AS1Q96NR2 134 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 GABRG3Q99928 467 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 STMN4Q9H169 189 aaPredicted RBP1.4□□□□□ -2.19
PTPN4-212ENST00000488896 FAM60AQ9NP50 221 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 ADA2Q9NZK5 511 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 ZMAT5Q9UDW3 170 aaKnown RBP1.4□□□□□ -2.19
PTPN4-212ENST00000488896 RHBDD3Q9Y3P4 386 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 KLF12Q9Y4X4 402 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 ENPP4Q9Y6X5 453 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 PLXNB3Q9ULL4 1909 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 SPATA31E1Q6ZUB1 1445 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 ELP1O95163 1332 aa1.4□□□□□ -2.19
PTPN4-212ENST00000488896 BAZ1BQ9UIG0 1483 aaKnown RBP1.39□□□□□ -2.19
PTPN4-212ENST00000488896 IGKV1OR2-108A0A075B7D4 117 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 TRAV8-6A0A0B4J262 113 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 A0A0G2JMP0 313 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 A0A0X1KG70 313 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 GOLGA8JA6NMD2 632 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 SMC2O95347 1197 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 TTC4O95801 387 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 SEC11BP0C7V7 166 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 GOLGA8HP0CJ92 632 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 PMCHP20382 165 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 PAX6P26367 422 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 GNRHRP30968 328 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 ERFP50548 548 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 TAS2R39P59534 338 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 RAB11AP62491 216 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 SLC35A1P78382 337 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 LCN2P80188 198 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 ATP5G2Q06055 141 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 ADIGQ0VDE8 80 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 RAB11BQ15907 218 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 TPRG1LQ5T0D9 272 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 PIP5KL1Q5T9C9 394 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 MLIPQ5VWP3 458 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 RNF10Q8N5U6 811 aaKnown RBP1.39□□□□□ -2.19
PTPN4-212ENST00000488896 CYB561A3Q8NBI2 242 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 PROKR2Q8NFJ6 384 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 FAM57AQ8TBR7 257 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 BAALCQ8WXS3 180 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 FXYD5Q96DB9 178 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 PEBP4Q96S96 227 aa1.39□□□□□ -2.19
PTPN4-212ENST00000488896 JCADQ9P266 1359 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 A0A1W2PNM2 257 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 GGTLC3B5MD39 225 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 J3QT63 122 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 CDS2O95674 445 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 GCGP01275 180 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 KLK1P06870 262 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 SLC35G6P0C7Q6 338 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 ARL2P36404 184 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 CLDN8P56748 225 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 MTPNP58546 118 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms