RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 RDH5Q92781 318 aa10.4□□□□□ -0.74
TRAIP-209ENST00000488860 HPS1Q92902 700 aa10.4□□□□□ -0.74
TRAIP-209ENST00000488860 YIPF5Q969M3 257 aa10.4□□□□□ -0.74
TRAIP-209ENST00000488860 C12orf43Q96C57 262 aaKnown RBP10.4□□□□□ -0.74
TRAIP-209ENST00000488860 ZNF488Q96MN9 340 aa10.4□□□□□ -0.74
TRAIP-209ENST00000488860 S100A13Q99584 98 aa10.4□□□□□ -0.74
TRAIP-209ENST00000488860 PKIBQ9C010 78 aa10.4□□□□□ -0.74
TRAIP-209ENST00000488860 RBM38Q9H0Z9 239 aaKnown RBP10.4□□□□□ -0.74
TRAIP-209ENST00000488860 TLNRD1Q9H1K6 362 aa10.4□□□□□ -0.74
TRAIP-209ENST00000488860 DCSTAMPQ9H295 470 aa10.4□□□□□ -0.74
TRAIP-209ENST00000488860 CNTD2Q9H8S5 307 aa10.4□□□□□ -0.74
TRAIP-209ENST00000488860 SMURF1Q9HCE7 757 aa10.4□□□□□ -0.74
TRAIP-209ENST00000488860 BEX4Q9NWD9 120 aaPredicted RBP10.4□□□□□ -0.74
TRAIP-209ENST00000488860 DCAF16Q9NXF7 216 aa10.4□□□□□ -0.74
TRAIP-209ENST00000488860 RSL24D1Q9UHA3 163 aaKnown RBP10.4□□□□□ -0.74
TRAIP-209ENST00000488860 ING4Q9UNL4 249 aa10.4□□□□□ -0.74
TRAIP-209ENST00000488860 MRPS28Q9Y2Q9 187 aaKnown RBP10.4□□□□□ -0.74
TRAIP-209ENST00000488860 V9GY05 133 aa10.4□□□□□ -0.74
TRAIP-209ENST00000488860 APCP25054 2843 aa10.4□□□□□ -0.74
TRAIP-209ENST00000488860 ABCA12Q86UK0 2595 aa10.4□□□□□ -0.74
TRAIP-209ENST00000488860 SMIM31A0A1B0GVY4 71 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 LRRC30A6NM36 301 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 C3orf80F5H4A9 247 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 SLC22A1O15245 554 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 AKR7A2O43488 359 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 PTBP3O95758 552 aaKnown RBP10.39□□□□□ -0.75
TRAIP-209ENST00000488860 F12P00748 615 aaPredicted RBP10.39□□□□□ -0.75
TRAIP-209ENST00000488860 EGR1P18146 543 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 COL8A2P25067 703 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 PMELP40967 661 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 IL24Q13007 206 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 PDZK1IP1Q13113 114 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 DEFB113Q30KQ7 82 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 FAM76BQ5HYJ3 339 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 CRIP3Q6Q6R5 217 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 WDR82Q6UXN9 313 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 NR2C2APQ86WQ0 139 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 C11orf53Q8IXP5 236 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 MKXQ8IYA7 352 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 ZNF525Q8N782 197 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 OR4D6Q8NGJ1 314 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 OR6M1Q8NGM8 313 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 ZNF671Q8TAW3 534 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 ERGIC1Q969X5 290 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 FOXRED1Q96CU9 486 aaPredicted RBP10.39□□□□□ -0.75
TRAIP-209ENST00000488860 BCL7BQ9BQE9 202 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 UQCC2Q9BRT2 126 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 GSX2Q9BZM3 304 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 BARX1Q9HBU1 254 aaPredicted RBP10.39□□□□□ -0.75
TRAIP-209ENST00000488860 TMEM106BQ9NUM4 274 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 ZNF701Q9NV72 531 aaPredicted RBP10.39□□□□□ -0.75
TRAIP-209ENST00000488860 RNF7Q9UBF6 113 aa10.39□□□□□ -0.75
TRAIP-209ENST00000488860 A0A0G2JK05 382 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 NOTOA8MTQ0 251 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 CLDN25C9JDP6 229 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 TRAPPC2LH3BP13 241 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 ZNF205O95201 554 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 IL1AP01583 271 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 CALCBP10092 127 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 SLC2A2P11168 524 aaPredicted RBP10.38□□□□□ -0.75
TRAIP-209ENST00000488860 BCL3P20749 454 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 SERPINA2P20848 420 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 MPZP25189 248 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 HTR2CP28335 458 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 RPS19P39019 145 aaKnown RBP10.38□□□□□ -0.75
TRAIP-209ENST00000488860 PTGFRP43088 359 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 PSMD7P51665 324 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 SNU13P55769 128 aaKnown RBP10.38□□□□□ -0.75
TRAIP-209ENST00000488860 CLDN12P56749 244 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 RSU1Q15404 277 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 FAM201AQ5SY85 155 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 SFXN4Q6P4A7 337 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 GLIPR1L1Q6UWM5 242 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 CDH26Q8IXH8 852 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 C1orf87Q8N0U7 546 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 POC1AQ8NBT0 407 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 C19orf18Q8NEA5 215 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 OR10K1Q8NGX5 313 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 OR51F2Q8NH61 342 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 Q8TCH9 128 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 EMG1Q92979 244 aaKnown RBP10.38□□□□□ -0.75
TRAIP-209ENST00000488860 NINJ1Q92982 152 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 CEP19Q96LK0 163 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 KCNK15Q9H427 330 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 DLL4Q9NR61 685 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 DAPK2Q9UIK4 370 aa10.38□□□□□ -0.75
TRAIP-209ENST00000488860 ARID1AO14497 2285 aa10.37□□□□□ -0.75
TRAIP-209ENST00000488860 IGHV3OR15-7A0A075B7D8 119 aa10.37□□□□□ -0.75
TRAIP-209ENST00000488860 A0A0B4J203 849 aa10.37□□□□□ -0.75
TRAIP-209ENST00000488860 IGKV1-12A0A0C4DH73 117 aa10.37□□□□□ -0.75
TRAIP-209ENST00000488860 ISPDA4D126 451 aa10.37□□□□□ -0.75
TRAIP-209ENST00000488860 IFITM5A6NNB3 132 aa10.37□□□□□ -0.75
TRAIP-209ENST00000488860 IFNL4K9M1U5 179 aa10.37□□□□□ -0.75
TRAIP-209ENST00000488860 AIPO00170 330 aa10.37□□□□□ -0.75
TRAIP-209ENST00000488860 SLC17A2O00624 439 aa10.37□□□□□ -0.75
TRAIP-209ENST00000488860 WNT9BO14905 357 aa10.37□□□□□ -0.75
TRAIP-209ENST00000488860 PPIHO43447 177 aaKnown RBP10.37□□□□□ -0.75
TRAIP-209ENST00000488860 RP2O75695 350 aa10.37□□□□□ -0.75
TRAIP-209ENST00000488860 NXPH2O95156 264 aa10.37□□□□□ -0.75
TRAIP-209ENST00000488860 HTR3BO95264 441 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms