RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 FOXL2NBQ6ZUU3 175 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 TMEM105Q8N8V8 129 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 OR14L1PQ8NHC6 308 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 NMES1Q9C002 83 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 CHST5Q9GZS9 411 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 ZNF700Q9H0M5 742 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 SH2D2AQ9NP31 389 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 HPF1Q9NWY4 346 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 PLA2G2EQ9NZK7 142 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 CRIM1Q9NZV1 1036 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 LSM5Q9Y4Y9 91 aaKnown RBP11.05□□□□□ -0.64
CLIC4-202ENST00000488683 MED13Q9UHV7 2174 aa11.05□□□□□ -0.64
CLIC4-202ENST00000488683 TRBV6-7A0A0A0MS04 114 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 PINLYPA6NC86 204 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 HSPB6O14558 160 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 GEMIN2O14893 280 aaKnown RBP11.04□□□□□ -0.64
CLIC4-202ENST00000488683 BET1O15155 118 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 FARS2O95363 451 aaKnown RBP11.04□□□□□ -0.64
CLIC4-202ENST00000488683 NFYBP25208 207 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 THBS4P35443 961 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 AKR1C3P42330 323 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 DSCR4P56555 118 aaPredicted RBP11.04□□□□□ -0.64
CLIC4-202ENST00000488683 HIST1H3AP68431 136 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 SPEM2Q0P670 501 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 AIMP2Q13155 320 aaKnown RBP11.04□□□□□ -0.64
CLIC4-202ENST00000488683 HIST2H3PS2Q5TEC6 136 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 OPN5Q6U736 354 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 HIST2H3AQ71DI3 136 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 RPS19BP1Q86WX3 136 aaKnown RBP11.04□□□□□ -0.64
CLIC4-202ENST00000488683 PUSL1Q8N0Z8 303 aaKnown RBP11.04□□□□□ -0.64
CLIC4-202ENST00000488683 OR4A4PQ8NGN8 299 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 OR11L1Q8NGX0 322 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 ABHD3Q8WU67 409 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 MRPL24Q96A35 216 aaKnown RBP11.04□□□□□ -0.64
CLIC4-202ENST00000488683 PHYHIPLQ96FC7 376 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 A0A087WZY1 265 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 A0A0U1RQV5 110 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 PCP4L1A6NKN8 68 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 ZNF705EA8MWA4 302 aaPredicted RBP11.04□□□□□ -0.64
CLIC4-202ENST00000488683 ZNF587BE7ETH6 402 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 XRCC2O43543 280 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 DIRAS3O95661 229 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 ALDH3B1P43353 468 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 RGS19P49795 217 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 SSR4P51571 173 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 ZNF133P52736 654 aaPredicted RBP11.04□□□□□ -0.64
CLIC4-202ENST00000488683 ACTBL2Q562R1 376 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 NAT6Q93015 286 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 SULT4A1Q9BR01 284 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 NKX6-2Q9C056 277 aaPredicted RBP11.04□□□□□ -0.64
CLIC4-202ENST00000488683 DNTTIP1Q9H147 329 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 TLNRD1Q9H1K6 362 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 TREM1Q9NP99 234 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 ZNF629Q9UEG4 869 aaPredicted RBP11.04□□□□□ -0.64
CLIC4-202ENST00000488683 AK3Q9UIJ7 227 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 PCDHGA1Q9Y5H4 931 aa11.04□□□□□ -0.64
CLIC4-202ENST00000488683 NSG1A0A0A6YYJ2 146 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 IGKV1-12A0A0C4DH73 117 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 TEX13DA0A0J9YY54 714 aaPredicted RBP11.03□□□□□ -0.64
CLIC4-202ENST00000488683 F8VVB4 439 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 F8VWA3 439 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 NXPH3O95157 252 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 IGKV1D-12P01611 117 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 KLK3P07288 261 aaPredicted RBP11.03□□□□□ -0.64
CLIC4-202ENST00000488683 ZNF32P17041 273 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 RBMXP38159 391 aaKnown RBP11.03□□□□□ -0.64
CLIC4-202ENST00000488683 FOXG1P55316 489 aaPredicted RBP11.03□□□□□ -0.64
CLIC4-202ENST00000488683 IL11RAQ14626 422 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 PDSS1Q5T2R2 415 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 HAS2Q92819 552 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 NTNG2Q96CW9 530 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 TSNAXQ99598 290 aaKnown RBP11.03□□□□□ -0.64
CLIC4-202ENST00000488683 HES7Q9BYE0 225 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 DEPPQ9NTK1 212 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 PCSK5Q92824 1860 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 A0A096LPE4 126 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 CCDC163A0A0D9SF12 145 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 A0A1W2PPZ6 126 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 LRP3O75074 770 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 TSPAN9O75954 239 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 FKBP2P26885 142 aaKnown RBP11.03□□□□□ -0.64
CLIC4-202ENST00000488683 Q6ZPA2 131 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 SLC16A14Q7RTX9 510 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 BAP18Q8IXM2 172 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 MARC2Q969Z3 335 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 HS3ST6Q96QI5 342 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.03□□□□□ -0.64
CLIC4-202ENST00000488683 BDP1A6H8Y1 2624 aa11.03□□□□□ -0.64
CLIC4-202ENST00000488683 SGCEO43556 437 aa11.02□□□□□ -0.64
CLIC4-202ENST00000488683 CELA3AP09093 270 aa11.02□□□□□ -0.64
CLIC4-202ENST00000488683 CLDN15P56746 228 aa11.02□□□□□ -0.64
CLIC4-202ENST00000488683 IAH1Q2TAA2 248 aaPredicted RBP11.02□□□□□ -0.64
CLIC4-202ENST00000488683 SPINK14Q6IE38 97 aa11.02□□□□□ -0.64
CLIC4-202ENST00000488683 VASH2Q86V25 355 aa11.02□□□□□ -0.64
CLIC4-202ENST00000488683 LDLRAD3Q86YD5 345 aa11.02□□□□□ -0.64
CLIC4-202ENST00000488683 MAML2Q8IZL2 1156 aaPredicted RBP11.02□□□□□ -0.64
CLIC4-202ENST00000488683 AGBL5Q8NDL9 886 aa11.02□□□□□ -0.64
CLIC4-202ENST00000488683 TM2D1Q9BX74 207 aa11.02□□□□□ -0.64
CLIC4-202ENST00000488683 OR51B6Q9H340 312 aa11.02□□□□□ -0.64
CLIC4-202ENST00000488683 RAB18Q9NP72 206 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms