RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 SEM1Q6ZVN7 128 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 PGAP1Q75T13 922 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 CD163Q86VB7 1156 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 ZNF100Q8IYN0 542 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 CPEB3Q8NE35 698 aaKnown RBP10.55□□□□□ -0.72
HDAC6-230ENST00000488543 SSC4DQ8WTU2 575 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 OR10A2Q9H208 303 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 UPB1Q9UBR1 384 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 MFSD2BA6NFX1 497 aa10.54□□□□□ -0.72
HDAC6-230ENST00000488543 SS18L1O75177 396 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-230ENST00000488543 RP2O75695 350 aa10.54□□□□□ -0.72
HDAC6-230ENST00000488543 CSF1P09603 554 aa10.54□□□□□ -0.72
HDAC6-230ENST00000488543 FCGR2AP12318 317 aa10.54□□□□□ -0.72
HDAC6-230ENST00000488543 GABRA1P14867 456 aa10.54□□□□□ -0.72
HDAC6-230ENST00000488543 THBS4P35443 961 aa10.54□□□□□ -0.72
HDAC6-230ENST00000488543 ARHGDIBP52566 201 aa10.54□□□□□ -0.72
HDAC6-230ENST00000488543 QRFPP83859 136 aa10.54□□□□□ -0.72
HDAC6-230ENST00000488543 RTL6Q6ICC9 239 aa10.54□□□□□ -0.72
HDAC6-230ENST00000488543 RGS7BPQ6MZT1 257 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-230ENST00000488543 CRIP3Q6Q6R5 217 aa10.54□□□□□ -0.72
HDAC6-230ENST00000488543 OR52H1Q8NGJ2 320 aa10.54□□□□□ -0.72
HDAC6-230ENST00000488543 SEH1LQ96EE3 360 aa10.54□□□□□ -0.72
HDAC6-230ENST00000488543 SEC22AQ96IW7 307 aa10.54□□□□□ -0.72
HDAC6-230ENST00000488543 UQCC2Q9BRT2 126 aa10.54□□□□□ -0.72
HDAC6-230ENST00000488543 PRORYQ9H606 182 aa10.54□□□□□ -0.72
HDAC6-230ENST00000488543 COL6A6A6NMZ7 2263 aa10.54□□□□□ -0.72
HDAC6-230ENST00000488543 TRAV14DV4A0A0A6YYC5 116 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 OR14I1A6ND48 311 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 WIPF3A6NGB9 483 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 AHRRA9YTQ3 701 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 FAUP35544 74 aaKnown RBP10.53□□□□□ -0.72
HDAC6-230ENST00000488543 OR3A2P47893 321 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 TDGF1P3P51864 188 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 IKZF1Q13422 519 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 GUSBP1Q15486 140 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 OR52W1Q6IF63 320 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 GSG1LQ6UXU4 331 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 GVQW1Q8N7I0 195 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 CNEP1R1Q8N9A8 125 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 OR2AE1Q8NHA4 323 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 MARVELD3Q96A59 401 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 GMPPAQ96IJ6 420 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-230ENST00000488543 SPACA5Q96QH8 159 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 GPR160Q9UJ42 338 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 RAB3DO95716 219 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 IL18BPO95998 194 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 HLA-HP01893 362 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 HOXD4P09016 255 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-230ENST00000488543 FAHP16930 419 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 KRTCAP3Q53RY4 240 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 LY6G6FQ5SQ64 297 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 ZNF660Q6AZW8 331 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-230ENST00000488543 VWA1Q6PCB0 445 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 FAM219AQ8IW50 185 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 SPERTQ8NA61 448 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 CCDC54Q8NEL0 328 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 WDR13Q9H1Z4 485 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 ATPIF1Q9UII2 106 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 FAM215AQ9Y5M1 114 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 INTS1Q8N201 2190 aaKnown RBP10.53□□□□□ -0.72
HDAC6-230ENST00000488543 ADGRG4Q8IZF6 3080 aa10.53□□□□□ -0.72
HDAC6-230ENST00000488543 LCATP04180 440 aa10.52□□□□□ -0.72
HDAC6-230ENST00000488543 ERCC1P07992 297 aaPredicted RBP10.52□□□□□ -0.72
HDAC6-230ENST00000488543 OR4E1P0C645 316 aa10.52□□□□□ -0.72
HDAC6-230ENST00000488543 PRF1P14222 555 aa10.52□□□□□ -0.72
HDAC6-230ENST00000488543 ACKR3P25106 362 aa10.52□□□□□ -0.72
HDAC6-230ENST00000488543 KIR2DL2P43627 348 aaPredicted RBP10.52□□□□□ -0.72
HDAC6-230ENST00000488543 MECP2P51608 486 aaKnown RBP10.52□□□□□ -0.72
HDAC6-230ENST00000488543 UNC119Q13432 240 aa10.52□□□□□ -0.72
HDAC6-230ENST00000488543 CDH26Q8IXH8 852 aa10.52□□□□□ -0.72
HDAC6-230ENST00000488543 PAQR4Q8N4S7 273 aaPredicted RBP10.52□□□□□ -0.72
HDAC6-230ENST00000488543 STEAP2Q8NFT2 490 aa10.52□□□□□ -0.72
HDAC6-230ENST00000488543 GPX8Q8TED1 209 aa10.52□□□□□ -0.72
HDAC6-230ENST00000488543 PTX4Q96A99 478 aa10.52□□□□□ -0.72
HDAC6-230ENST00000488543 REEP6Q96HR9 211 aa10.52□□□□□ -0.72
HDAC6-230ENST00000488543 C1orf147Q96MC9 270 aaPredicted RBP10.52□□□□□ -0.72
HDAC6-230ENST00000488543 SLC6A7Q99884 636 aa10.52□□□□□ -0.72
HDAC6-230ENST00000488543 MFFQ9GZY8 342 aa10.52□□□□□ -0.72
HDAC6-230ENST00000488543 PCNX1Q96RV3 2341 aa10.52□□□□□ -0.72
HDAC6-230ENST00000488543 TMEM82A0PJX8 343 aa10.52□□□□□ -0.73
HDAC6-230ENST00000488543 EDN3P14138 238 aa10.52□□□□□ -0.73
HDAC6-230ENST00000488543 RAB6AP20340 208 aa10.52□□□□□ -0.73
HDAC6-230ENST00000488543 M6PRP20645 277 aa10.52□□□□□ -0.73
HDAC6-230ENST00000488543 ZNF93P35789 620 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-230ENST00000488543 NUP62P37198 522 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-230ENST00000488543 GK2Q14410 553 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-230ENST00000488543 UBE2V2Q15819 145 aa10.52□□□□□ -0.73
HDAC6-230ENST00000488543 FBXW9Q5XUX1 488 aa10.52□□□□□ -0.73
HDAC6-230ENST00000488543 ATRAIDQ6UW56 229 aa10.52□□□□□ -0.73
HDAC6-230ENST00000488543 FAM214BQ7L5A3 538 aa10.52□□□□□ -0.73
HDAC6-230ENST00000488543 KDF1Q8NAX2 398 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-230ENST00000488543 NAXEQ8NCW5 288 aa10.52□□□□□ -0.73
HDAC6-230ENST00000488543 OR1K1Q8NGR3 316 aa10.52□□□□□ -0.73
HDAC6-230ENST00000488543 NUDCD2Q8WVJ2 157 aa10.52□□□□□ -0.73
HDAC6-230ENST00000488543 KIF25Q9UIL4 384 aa10.52□□□□□ -0.73
HDAC6-230ENST00000488543 SH3BGRL2Q9UJC5 107 aa10.52□□□□□ -0.73
HDAC6-230ENST00000488543 TUBD1Q9UJT1 453 aa10.52□□□□□ -0.73
HDAC6-230ENST00000488543 PIGLQ9Y2B2 252 aa10.52□□□□□ -0.73
HDAC6-230ENST00000488543 VSIG8P0DPA2 414 aa10.51□□□□□ -0.73
HDAC6-230ENST00000488543 MPGP29372 298 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms