RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 GALNT17Q6IS24 598 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 SLC25A34Q6PIV7 304 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 Q6ZR03 302 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 ZNF493Q6ZR52 646 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 TPRX1Q8N7U7 411 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 ZDHHC22Q8N966 263 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 OR5B17Q8NGF7 314 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 OR4S2Q8NH73 311 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 N4BP2L2Q92802 583 aaPredicted RBP2.42□□□□□ -2.02
ITGB1-214ENST00000488427 C8orf44Q96CB5 159 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 TM4SF18Q96CE8 201 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 OR10C1Q96KK4 312 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 TMEM59Q9BXS4 323 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 ULBP1Q9BZM6 244 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 DDX19AQ9NUU7 478 aaKnown RBP2.42□□□□□ -2.02
ITGB1-214ENST00000488427 KLHL28Q9NXS3 571 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 OPN4Q9UHM6 478 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 ZNF222Q9UK12 451 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 NXT1Q9UKK6 140 aaKnown RBP2.42□□□□□ -2.02
ITGB1-214ENST00000488427 DDX19BQ9UMR2 479 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 DNAH9Q9NYC9 4486 aa2.42□□□□□ -2.02
ITGB1-214ENST00000488427 IGHV3-74A0A0B4J1X5 117 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 CIB4A0PJX0 185 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 K7EIL1 84 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 KMOO15229 486 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 KLRC4O43908 158 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 NEMFO60524 1076 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 CLDN11O75508 207 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 OR2B3O76000 313 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 OR7A10O76100 309 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 ASS1P00966 412 aaKnown RBP2.41□□□□□ -2.02
ITGB1-214ENST00000488427 SOD3P08294 240 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 IGHV1-8P0DP01 117 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 LOXP28300 417 aaPredicted RBP2.41□□□□□ -2.02
ITGB1-214ENST00000488427 OPRM1P35372 400 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 VHLP40337 213 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 REG3AQ06141 175 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 PRSS8Q16651 343 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 ZNF880Q6PDB4 577 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 OAFQ86UD1 273 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 PRSS58Q8IYP2 241 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 OR5D13Q8NGL4 314 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 C10orf105Q8TEF2 133 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 RGP1Q92546 391 aaPredicted RBP2.41□□□□□ -2.02
ITGB1-214ENST00000488427 BTN2A3PQ96KV6 586 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 WFIKKN1Q96NZ8 548 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 SERPINB11Q96P15 392 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 CNN2Q99439 309 aaKnown RBP2.41□□□□□ -2.02
ITGB1-214ENST00000488427 P2RX4Q99571 388 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 ERP44Q9BS26 406 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 SIRT7Q9NRC8 400 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 HMGXB4Q9UGU5 601 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 PTBP2Q9UKA9 531 aaKnown RBP2.41□□□□□ -2.02
ITGB1-214ENST00000488427 KLF13Q9Y2Y9 288 aaPredicted RBP2.41□□□□□ -2.02
ITGB1-214ENST00000488427 PEX16Q9Y5Y5 336 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 NPTNQ9Y639 398 aa2.41□□□□□ -2.02
ITGB1-214ENST00000488427 A0A1B0GVI7 797 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 C5orf63A6NC05 138 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 PDZK1P1A8MUH7 402 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 SNNO75324 88 aaPredicted RBP2.4□□□□□ -2.03
ITGB1-214ENST00000488427 EIF3GO75821 320 aaKnown RBP eCLIP2.4□□□□□ -2.03
ITGB1-214ENST00000488427 IGHV2-5P01817 119 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 HLA-DPB1P04440 258 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 PRPS2P11908 318 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 IFNA8P32881 189 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 SERPINB5P36952 375 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 FBXW4P57775 412 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 CLINT1Q14677 625 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 ZNHIT3Q15649 155 aaPredicted RBP2.4□□□□□ -2.03
ITGB1-214ENST00000488427 PMF1Q6P1K2 205 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 H2BFWTQ7Z2G1 175 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 HDDC2Q7Z4H3 204 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 LUZP2Q86TE4 346 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 UNC93AQ86WB7 457 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 OOSP2Q86WS3 158 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 ISG20Q96AZ6 181 aaKnown RBP2.4□□□□□ -2.03
ITGB1-214ENST00000488427 CREB3L1Q96BA8 519 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 MS4A4EQ96PG1 132 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 ZNF2Q9BSG1 426 aaPredicted RBP2.4□□□□□ -2.03
ITGB1-214ENST00000488427 ZSCAN5AQ9BUG6 496 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 FAIM2Q9BWQ8 316 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 OSBPL11Q9BXB4 747 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 MRPL37Q9BZE1 423 aaKnown RBP2.4□□□□□ -2.03
ITGB1-214ENST00000488427 ETNK2Q9NVF9 386 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 CTSFQ9UBX1 484 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 GLS2Q9UI32 602 aa2.4□□□□□ -2.03
ITGB1-214ENST00000488427 F11RQ9Y624 299 aaKnown RBP2.4□□□□□ -2.03
ITGB1-214ENST00000488427 IGLV1-50A0A075B6I6 118 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 IGHV1-45A0A0A0MS14 117 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 A0A0D9SEW6 157 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 GOLGA8IPA6NC78 632 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 GOLGA6L4A6NEF3 574 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 GOLGA8JA6NMD2 632 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 ZNF705GA8MUZ8 300 aaPredicted RBP2.39□□□□□ -2.03
ITGB1-214ENST00000488427 H0YHG0 523 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 TIMM8AO60220 97 aaPredicted RBP2.39□□□□□ -2.03
ITGB1-214ENST00000488427 MTX2O75431 263 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 GABARAPO95166 117 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 FABP3P05413 133 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 PRB4P10163 310 aaPredicted RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms