RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 DNAL1Q4LDG9 190 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 CEP78Q5JTW2 689 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 TEX30Q5JUR7 227 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 BTNL3Q6UXE8 466 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 DCDC5Q6ZRR9 648 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 AMIGO2Q86SJ2 522 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 C1orf87Q8N0U7 546 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 FAM216BQ8N7L0 139 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 OR1M1Q8NGA1 313 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 OR8B12Q8NGG6 310 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 OR8S1Q8NH09 359 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 OTOSQ8NHW6 89 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 RNF133Q8WVZ7 376 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 RAB40AQ8WXH6 277 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 ST8SIA4Q92187 359 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 PIGCQ92535 297 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 RPL3LQ92901 407 aaKnown RBP4.88□□□□□ -1.63
CDHR3-213ENST00000488386 POP5Q969H6 163 aaKnown RBP4.88□□□□□ -1.63
CDHR3-213ENST00000488386 PLEKHA8Q96JA3 519 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 CCL13Q99616 98 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 PCGF1Q9BSM1 259 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 PAPOLGQ9BWT3 736 aaKnown RBP4.88□□□□□ -1.63
CDHR3-213ENST00000488386 SUCNR1Q9BXA5 334 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 WDR13Q9H1Z4 485 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 SEMA6AQ9H2E6 1030 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 FN3KRPQ9HA64 309 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 MRPL15Q9P015 296 aaKnown RBP4.88□□□□□ -1.63
CDHR3-213ENST00000488386 KIF17Q9P2E2 1029 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 CLN8Q9UBY8 286 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 MIOXQ9UGB7 285 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 LRCH1Q9Y2L9 728 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 LRP12Q9Y561 859 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 PCDHGB1Q9Y5G3 927 aa4.88□□□□□ -1.63
CDHR3-213ENST00000488386 PPIAL4CA0A0B4J2A2 164 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 KIR2DS1A0A191URI9 304 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 TMEM89A2RUT3 159 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 ARRDC5A6NEK1 342 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.87□□□□□ -1.63
CDHR3-213ENST00000488386 DVL1O14640 695 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 TNFRSF13BO14836 293 aaPredicted RBP4.87□□□□□ -1.63
CDHR3-213ENST00000488386 AKR7A2O43488 359 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 GMDSO60547 372 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 RHBDL1O75783 438 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 PAICSP22234 425 aaKnown RBP4.87□□□□□ -1.63
CDHR3-213ENST00000488386 POLR2IP36954 125 aaKnown RBP4.87□□□□□ -1.63
CDHR3-213ENST00000488386 PSMB10P40306 273 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 SLC15A1P46059 708 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 CRISP1P54107 249 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 ARF6P62330 175 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 SRSF4Q08170 494 aaKnown RBP4.87□□□□□ -1.63
CDHR3-213ENST00000488386 MFGE8Q08431 387 aaPredicted RBP4.87□□□□□ -1.63
CDHR3-213ENST00000488386 BNIP1Q12981 228 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 PRDX4Q13162 271 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 PTGES3Q15185 160 aaKnown RBP4.87□□□□□ -1.63
CDHR3-213ENST00000488386 SLC9A3R2Q15599 337 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 SMN1Q16637 294 aaKnown RBP4.87□□□□□ -1.63
CDHR3-213ENST00000488386 ODF4Q2M2E3 257 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 DEFB112Q30KQ8 113 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 AWAT1Q58HT5 328 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 WDR38Q5JTN6 314 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 WDR82Q6UXN9 313 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 KCTD8Q6ZWB6 473 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 BTN2A1Q7KYR7 527 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 SHFQ7M4L6 423 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 SSX6Q7RTT6 188 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 KRT77Q7Z794 578 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 COMMD2Q86X83 199 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.87□□□□□ -1.63
CDHR3-213ENST00000488386 PNKDQ8N490 385 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 C3orf56Q8N813 242 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 FAM216AQ8WUB2 273 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 HPSE2Q8WWQ2 592 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 R3HDM4Q96D70 268 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 FAM71F1Q96KD3 344 aaPredicted RBP4.87□□□□□ -1.63
CDHR3-213ENST00000488386 ZNF488Q96MN9 340 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 IL4I1Q96RQ9 567 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 TBX15Q96SF7 602 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 TBX5Q99593 518 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 ZNF556Q9HAH1 456 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 ELL3Q9HB65 397 aaPredicted RBP4.87□□□□□ -1.63
CDHR3-213ENST00000488386 SLC25A19Q9HC21 320 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 PAPOLBQ9NRJ5 636 aaKnown RBP4.87□□□□□ -1.63
CDHR3-213ENST00000488386 ERVK-18Q9QC07 812 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 DNAJB9Q9UBS3 223 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 GTF2A1LQ9UNN4 478 aa4.87□□□□□ -1.63
CDHR3-213ENST00000488386 STAB1Q9NY15 2570 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 FBN3Q75N90 2809 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 TRAV38-1A0A0B4J264 116 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 CENPVL3A0A0U1RRI6 287 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 SAC3D1A6NKF1 404 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 IFNL4K9M1U5 179 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 PHYHO14832 338 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 INMTO95050 263 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 RPP14O95059 124 aaKnown RBP4.86□□□□□ -1.63
CDHR3-213ENST00000488386 PTBP3O95758 552 aaKnown RBP4.86□□□□□ -1.63
CDHR3-213ENST00000488386 LHBP01229 141 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 HMGN1P05114 100 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 ANXA8P13928 327 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 ALOX5APP20292 161 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 PRTN3P24158 256 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms