RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 TAGLN2P37802 199 aaKnown RBP12.47□□□□□ -0.41
COL16A1-214ENST00000488128 RABIFP47224 123 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 GFERP55789 205 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 ZNF121P58317 390 aaPredicted RBP12.47□□□□□ -0.41
COL16A1-214ENST00000488128 MRPS21P82921 87 aaKnown RBP12.47□□□□□ -0.41
COL16A1-214ENST00000488128 HMGN3Q15651 99 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 C20orf196Q8IYI0 205 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 OR8B12Q8NGG6 310 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 OR52M1Q8NGK5 317 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 CCNL2Q96S94 520 aaPredicted RBP12.47□□□□□ -0.41
COL16A1-214ENST00000488128 CHST5Q9GZS9 411 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 LIME1Q9H400 295 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 NXT1Q9UKK6 140 aaKnown RBP12.47□□□□□ -0.41
COL16A1-214ENST00000488128 MCTS1Q9ULC4 181 aaKnown RBP12.47□□□□□ -0.41
COL16A1-214ENST00000488128 ZDHHC8Q9ULC8 765 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 SRPK3Q9UPE1 567 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 IGKV1-9A0A0C4DH69 117 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 MT-ATP6P00846 226 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 IFNA21P01568 189 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 TRGC2P03986 189 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 GUSBP08236 651 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 SOD3P08294 240 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 GSTP1P09211 210 aaKnown RBP12.47□□□□□ -0.41
COL16A1-214ENST00000488128 FABP4P15090 132 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 ZNF17P17021 662 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 IGLV3-21P80748 117 aaPredicted RBP12.47□□□□□ -0.41
COL16A1-214ENST00000488128 FAM3AP98173 230 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 CHAF1BQ13112 559 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 RSU1Q15404 277 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 OPN5Q6U736 354 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 SGPP2Q8IWX5 399 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 C9orf40Q8IXQ3 194 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 Q8WTZ3 238 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 PRDM13Q9H4Q3 707 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 HS3ST3B1Q9Y662 390 aa12.47□□□□□ -0.41
COL16A1-214ENST00000488128 SPTY2D1-AS1A0A0U1RR47 76 aa12.46□□□□□ -0.41
COL16A1-214ENST00000488128 CYB5BO43169 146 aa12.46□□□□□ -0.41
COL16A1-214ENST00000488128 CDX1P47902 265 aaPredicted RBP12.46□□□□□ -0.41
COL16A1-214ENST00000488128 SLC6A8P48029 635 aa12.46□□□□□ -0.41
COL16A1-214ENST00000488128 POLR2HP52434 150 aaKnown RBP12.46□□□□□ -0.41
COL16A1-214ENST00000488128 ERVFRD-1P60508 538 aa12.46□□□□□ -0.41
COL16A1-214ENST00000488128 OGFOD3Q6PK18 319 aa12.46□□□□□ -0.41
COL16A1-214ENST00000488128 LYPD6BQ8NI32 183 aa12.46□□□□□ -0.41
COL16A1-214ENST00000488128 PIGTQ969N2 578 aa12.46□□□□□ -0.41
COL16A1-214ENST00000488128 ZNF700Q9H0M5 742 aa12.46□□□□□ -0.41
COL16A1-214ENST00000488128 TUBA4BQ9H853 241 aa12.46□□□□□ -0.41
COL16A1-214ENST00000488128 KIR2DS5A0A0G2JLQ3 304 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 A0A0G2JNG1 304 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 KIR2DS3K7RE56 304 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 NPIPB7O75200 414 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 QDPRP09417 244 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 OR5AC1P0C628 307 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 APOBEC1P41238 236 aaKnown RBP12.46□□□□□ -0.42
COL16A1-214ENST00000488128 HSD17B7P56937 341 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 PIGPP57054 158 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 HSF1Q00613 529 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 KIR2DS5Q14953 304 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 NUP54Q7Z3B4 507 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 OR5L1Q8NGL2 311 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 OR14K1Q8NGZ2 314 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 ASB10Q8WXI3 467 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 EMG1Q92979 244 aaKnown RBP12.46□□□□□ -0.42
COL16A1-214ENST00000488128 ADIPOR1Q96A54 375 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 NTNG2Q96CW9 530 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 RAB39BQ96DA2 213 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 SCGB3A2Q96PL1 93 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 LMAN1LQ9HAT1 526 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 HS3ST3A1Q9Y663 406 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 POMT1Q9Y6A1 747 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 RALGAPA1Q6GYQ0 2036 aa12.46□□□□□ -0.42
COL16A1-214ENST00000488128 ZNF726A6NNF4 738 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 H3BQ15 152 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 TMEM225BP0DP42 221 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 LTBRP36941 435 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 DTX1Q86Y01 620 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 BATF2Q8N1L9 274 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 GPHA2Q96T91 129 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 LIPGQ9Y5X9 500 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.45□□□□□ -0.42
COL16A1-214ENST00000488128 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.45□□□□□ -0.42
COL16A1-214ENST00000488128 FIGNL2A6NMB9 653 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 HIST1H2BKO60814 126 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 HIST1H2BJP06899 126 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 HIST1H2BOP23527 126 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 HIST1H2BBP33778 126 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 HIST1H2BDP58876 126 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 HIST1H2BCP62807 126 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 PDCD1Q15116 288 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 RHEBQ15382 184 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 NSDHLQ15738 373 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 HIST2H2BEQ16778 126 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.45□□□□□ -0.42
COL16A1-214ENST00000488128 HIST1H2BHQ93079 126 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 SLC46A1Q96NT5 459 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 KCNK17Q96T54 332 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 HIST1H2BNQ99877 126 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 HIST1H2BMQ99879 126 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 URM1Q9BTM9 101 aaKnown RBP12.45□□□□□ -0.42
COL16A1-214ENST00000488128 TPSD1Q9BZJ3 242 aa12.45□□□□□ -0.42
COL16A1-214ENST00000488128 VN1R1Q9GZP7 353 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms