RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 PPP1R3EQ9H7J1 279 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 LPAR2Q9HBW0 351 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 KAAG1Q9UBP8 84 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 A6NIN4 97 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 INAFM1C9JVW0 142 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 H3BSH0 61 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 GPR37O15354 613 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 ADAM20O43506 726 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 DENRO43583 198 aaKnown RBP12.24□□□□□ -0.45
LIMS3-205ENST00000487150 PLPP2O43688 288 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 NOS1APO75052 506 aaPredicted RBP12.24□□□□□ -0.45
LIMS3-205ENST00000487150 ZNF205O95201 554 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 RAB3AP20336 220 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 EEF1B2P24534 225 aaKnown RBP12.24□□□□□ -0.45
LIMS3-205ENST00000487150 AZGP1P25311 298 aaKnown RBP12.24□□□□□ -0.45
LIMS3-205ENST00000487150 GTF2A1P52655 376 aaPredicted RBP12.24□□□□□ -0.45
LIMS3-205ENST00000487150 MTCP1P56278 107 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 GABARAPL2P60520 117 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 SPHARQ15513 63 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 UBE2V2Q15819 145 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 CHRFAM7AQ494W8 412 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 FAM201AQ5SY85 155 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 DCAF12L2Q5VW00 463 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 SFRP4Q6FHJ7 346 aaPredicted RBP12.24□□□□□ -0.45
LIMS3-205ENST00000487150 BTNL3Q6UXE8 466 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 MKXQ8IYA7 352 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 OR51A4Q8NGJ6 313 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 TRMT10AQ8TBZ6 339 aaKnown RBP12.24□□□□□ -0.45
LIMS3-205ENST00000487150 GHSRQ92847 366 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 MED30Q96HR3 178 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 YTHDF1Q9BYJ9 559 aaKnown RBP12.24□□□□□ -0.45
LIMS3-205ENST00000487150 RHOFQ9HBH0 211 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 NLKQ9UBE8 527 aa12.24□□□□□ -0.45
LIMS3-205ENST00000487150 TMPRSS2O15393 492 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 CRLF1O75462 422 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 NXPH2O95156 264 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 ECDO95905 644 aaPredicted RBP12.23□□□□□ -0.45
LIMS3-205ENST00000487150 PGA5P0DJD9 388 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 LCN2P80188 198 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 GPR50Q13585 617 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 CR1LQ2VPA4 569 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 Q499Y3 187 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 ATPAF1Q5TC12 328 aaPredicted RBP12.23□□□□□ -0.45
LIMS3-205ENST00000487150 STUMQ69YW2 141 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 SVOPQ8N4V2 548 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 MS4A15Q8N5U1 240 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 OR13C9Q8NGT0 318 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 OR10AC1Q8NH08 325 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 NPRL2Q8WTW4 380 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 TMEM106AQ96A25 262 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 CEP19Q96LK0 163 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 NRIP2Q9BQI9 281 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 BEX2Q9BXY8 128 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 CCDC90BQ9GZT6 254 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 METTL17Q9H7H0 456 aaPredicted RBP12.23□□□□□ -0.45
LIMS3-205ENST00000487150 ABCA1O95477 2261 aa12.23□□□□□ -0.45
LIMS3-205ENST00000487150 OR2AT4A6NND4 320 aa12.22□□□□□ -0.45
LIMS3-205ENST00000487150 AKR7A2O43488 359 aa12.22□□□□□ -0.45
LIMS3-205ENST00000487150 ENSAO43768 121 aaKnown RBP12.22□□□□□ -0.45
LIMS3-205ENST00000487150 GYPAP02724 150 aa12.22□□□□□ -0.45
LIMS3-205ENST00000487150 LIPFP07098 398 aa12.22□□□□□ -0.45
LIMS3-205ENST00000487150 HCKP08631 526 aa12.22□□□□□ -0.45
LIMS3-205ENST00000487150 EGR1P18146 543 aa12.22□□□□□ -0.45
LIMS3-205ENST00000487150 CELP19835 753 aa12.22□□□□□ -0.45
LIMS3-205ENST00000487150 PSMA1P25786 263 aaKnown RBP12.22□□□□□ -0.45
LIMS3-205ENST00000487150 IL13RA1P78552 427 aa12.22□□□□□ -0.45
LIMS3-205ENST00000487150 MED22Q15528 200 aa12.22□□□□□ -0.45
LIMS3-205ENST00000487150 TBCEQ15813 527 aaPredicted RBP12.22□□□□□ -0.45
LIMS3-205ENST00000487150 LRRC10Q5BKY1 277 aa12.22□□□□□ -0.45
LIMS3-205ENST00000487150 WDR25Q64LD2 544 aaPredicted RBP12.22□□□□□ -0.45
LIMS3-205ENST00000487150 XAF1Q6GPH4 301 aa12.22□□□□□ -0.45
LIMS3-205ENST00000487150 SAXO1Q8IYX7 474 aa12.22□□□□□ -0.45
LIMS3-205ENST00000487150 UFD1Q92890 307 aa12.22□□□□□ -0.45
LIMS3-205ENST00000487150 PGLYRP3Q96LB9 341 aa12.22□□□□□ -0.45
LIMS3-205ENST00000487150 MRI1Q9BV20 369 aa12.22□□□□□ -0.45
LIMS3-205ENST00000487150 ISYNA1Q9NPH2 558 aa12.22□□□□□ -0.45
LIMS3-205ENST00000487150 PAK1IP1Q9NWT1 392 aaPredicted RBP12.22□□□□□ -0.45
LIMS3-205ENST00000487150 CR1P17927 2039 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 TEP1Q99973 2627 aaKnown RBP12.21□□□□□ -0.45
LIMS3-205ENST00000487150 TRBV5-5A0A0J9YX44 114 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 TRAPPC2LH3BP13 241 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.21□□□□□ -0.45
LIMS3-205ENST00000487150 NDUFB3O43676 98 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 RHBDL1O75783 438 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 LALBAP00709 142 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 KNG1P01042 644 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 FSTP19883 344 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 SOX2P48431 317 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 BMXP51813 675 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 IRF3Q14653 427 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 TRAM1Q15629 374 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 FAM120AOSQ5T036 256 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 FAHD2BQ6P2I3 314 aaPredicted RBP12.21□□□□□ -0.45
LIMS3-205ENST00000487150 SLC25A26Q70HW3 274 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 PNLDC1Q8NA58 520 aaKnown RBP12.21□□□□□ -0.45
LIMS3-205ENST00000487150 ZSCAN4Q8NAM6 433 aaPredicted RBP12.21□□□□□ -0.45
LIMS3-205ENST00000487150 C19orf18Q8NEA5 215 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 FAHD2AQ96GK7 314 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 DMRTB1Q96MA1 342 aa12.21□□□□□ -0.45
LIMS3-205ENST00000487150 TMEM138Q9NPI0 162 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms