RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 C19orf12Q9NSK7 152 aa20.06■□□□□ 0.8
LIME1-206ENST00000487026 MTRF1O75570 445 aaKnown RBP20.05■□□□□ 0.8
LIME1-206ENST00000487026 CLPXO76031 633 aa20.05■□□□□ 0.8
LIME1-206ENST00000487026 HAAOP46952 286 aa20.05■□□□□ 0.8
LIME1-206ENST00000487026 CEBPDP49716 269 aaPredicted RBP20.05■□□□□ 0.8
LIME1-206ENST00000487026 BCL2L15Q5TBC7 163 aa20.05■□□□□ 0.8
LIME1-206ENST00000487026 SLX4IPQ5VYV7 408 aa20.05■□□□□ 0.8
LIME1-206ENST00000487026 NCR3LG1Q68D85 454 aa20.05■□□□□ 0.8
LIME1-206ENST00000487026 POC1AQ8NBT0 407 aa20.05■□□□□ 0.8
LIME1-206ENST00000487026 TMEM163Q8TC26 289 aa20.05■□□□□ 0.8
LIME1-206ENST00000487026 ITFG2Q969R8 447 aa20.05■□□□□ 0.8
LIME1-206ENST00000487026 RASL12Q9NYN1 266 aa20.05■□□□□ 0.8
LIME1-206ENST00000487026 MRM2Q9UI43 246 aaKnown RBP20.05■□□□□ 0.8
LIME1-206ENST00000487026 OR52A1Q9UKL2 312 aa20.05■□□□□ 0.8
LIME1-206ENST00000487026 R4GMQ9 66 aa20.05■□□□□ 0.8
LIME1-206ENST00000487026 A0A1B0GTI1 187 aa20.04■□□□□ 0.8
LIME1-206ENST00000487026 ZAR1LA6NP61 321 aa20.04■□□□□ 0.8
LIME1-206ENST00000487026 G3V2T6 193 aa20.04■□□□□ 0.8
LIME1-206ENST00000487026 M0QZ24 198 aa20.04■□□□□ 0.8
LIME1-206ENST00000487026 ATP6AP1Q15904 470 aa20.04■□□□□ 0.8
LIME1-206ENST00000487026 MIDNQ504T8 468 aa20.04■□□□□ 0.8
LIME1-206ENST00000487026 CLVS2Q5SYC1 327 aa20.04■□□□□ 0.8
LIME1-206ENST00000487026 NXNL2Q5VZ03 156 aa20.04■□□□□ 0.8
LIME1-206ENST00000487026 ASRGL1Q7L266 308 aa20.04■□□□□ 0.8
LIME1-206ENST00000487026 ELMOD2Q8IZ81 293 aa20.04■□□□□ 0.8
LIME1-206ENST00000487026 PRRG3Q9BZD7 231 aa20.04■□□□□ 0.8
LIME1-206ENST00000487026 C16orf95Q9H693 158 aa20.04■□□□□ 0.8
LIME1-206ENST00000487026 SLC22A13Q9Y226 551 aa20.04■□□□□ 0.8
LIME1-206ENST00000487026 V9GYS6 101 aa20.04■□□□□ 0.8
LIME1-206ENST00000487026 TRBV23-1A0A0A0MS06 115 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 SLC22A31A6NKX4 558 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 ZNF670-ZNF695F2Z2N8 137 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 TIMM23O14925 209 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 ANGPTL7O43827 346 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 PAX6P26367 422 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 PRDX2P32119 198 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 ACSM1Q08AH1 577 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 C12orf73Q69YU5 71 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 ZNF573Q86YE8 665 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 MKXQ8IYA7 352 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 OR4M1Q8NGD0 313 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 OR14K1Q8NGZ2 314 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 RORBQ92753 470 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 TBX5Q99593 518 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 TCF7L1Q9HCS4 588 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 CLN6Q9NWW5 311 aa20.03■□□□□ 0.8
LIME1-206ENST00000487026 SF3B6Q9Y3B4 125 aaKnown RBP20.03■□□□□ 0.8
LIME1-206ENST00000487026 PQLC2LA1A4F0 135 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 H3BSH0 61 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 RPP14O95059 124 aaKnown RBP20.02■□□□□ 0.8
LIME1-206ENST00000487026 PGA5P0DJD9 388 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 ERVFRD-1P60508 538 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 ACTR3P61158 418 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 ODF4Q2M2E3 257 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 SMIM21Q3B7S5 101 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 TMEM42Q69YG0 159 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 KDM4DQ6B0I6 523 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 SSX6Q7RTT6 188 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 AMIGO2Q86SJ2 522 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 OR51G2Q8NGK0 314 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 OR5D13Q8NGL4 314 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 AJUBAQ96IF1 538 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 RBM4BQ9BQ04 359 aaKnown RBP20.02■□□□□ 0.8
LIME1-206ENST00000487026 PPA2Q9H2U2 334 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 FAM53CQ9NYF3 392 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 SNX5Q9Y5X3 404 aa20.02■□□□□ 0.8
LIME1-206ENST00000487026 NOTCH1P46531 2555 aa20.01■□□□□ 0.79
LIME1-206ENST00000487026 ANKRD61A6NGH8 418 aa20.01■□□□□ 0.79
LIME1-206ENST00000487026 H3BUX3 64 aa20.01■□□□□ 0.79
LIME1-206ENST00000487026 J3QT63 122 aa20.01■□□□□ 0.79
LIME1-206ENST00000487026 DLGAP1O14490 977 aa20.01■□□□□ 0.79
LIME1-206ENST00000487026 TGFBR2P37173 567 aa20.01■□□□□ 0.79
LIME1-206ENST00000487026 TMEM200BQ69YZ2 307 aa20.01■□□□□ 0.79
LIME1-206ENST00000487026 SLC35E4Q6ICL7 350 aa20.01■□□□□ 0.79
LIME1-206ENST00000487026 ANGPTL5Q86XS5 388 aa20.01■□□□□ 0.79
LIME1-206ENST00000487026 BEND2Q8NDZ0 799 aa20.01■□□□□ 0.79
LIME1-206ENST00000487026 OR5R1Q8NH85 324 aa20.01■□□□□ 0.79
LIME1-206ENST00000487026 MNTQ99583 582 aa20.01■□□□□ 0.79
LIME1-206ENST00000487026 SSX3Q99909 188 aa20.01■□□□□ 0.79
LIME1-206ENST00000487026 MOB1AQ9H8S9 216 aa20.01■□□□□ 0.79
LIME1-206ENST00000487026 OR14J1Q9UGF5 321 aa20.01■□□□□ 0.79
LIME1-206ENST00000487026 SLC1A7O00341 560 aa20■□□□□ 0.79
LIME1-206ENST00000487026 TSPAN9O75954 239 aa20■□□□□ 0.79
LIME1-206ENST00000487026 NXPH2O95156 264 aa20■□□□□ 0.79
LIME1-206ENST00000487026 APOL3O95236 402 aa20■□□□□ 0.79
LIME1-206ENST00000487026 RPL31P62899 125 aaKnown RBP20■□□□□ 0.79
LIME1-206ENST00000487026 EGR3Q06889 387 aa20■□□□□ 0.79
LIME1-206ENST00000487026 BNIP1Q12981 228 aa20■□□□□ 0.79
LIME1-206ENST00000487026 LY6EQ16553 131 aa20■□□□□ 0.79
LIME1-206ENST00000487026 PDLIM3Q53GG5 364 aaPredicted RBP20■□□□□ 0.79
LIME1-206ENST00000487026 CALHM1Q8IU99 346 aa20■□□□□ 0.79
LIME1-206ENST00000487026 ZNF561Q8N587 486 aa20■□□□□ 0.79
LIME1-206ENST00000487026 YIPF7Q8N8F6 280 aa20■□□□□ 0.79
LIME1-206ENST00000487026 OR2T27Q8NH04 317 aa20■□□□□ 0.79
LIME1-206ENST00000487026 NRIP2Q9BQI9 281 aa20■□□□□ 0.79
LIME1-206ENST00000487026 AP4S1Q9Y587 144 aa20■□□□□ 0.79
LIME1-206ENST00000487026 NOS1APO75052 506 aaPredicted RBP19.99■□□□□ 0.79
LIME1-206ENST00000487026 FASP25445 335 aa19.99■□□□□ 0.79
LIME1-206ENST00000487026 POLR2IP36954 125 aaKnown RBP19.99■□□□□ 0.79
LIME1-206ENST00000487026 OCLNQ16625 522 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms