RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 MRPL20Q9BYC9 149 aaKnown RBP2.56□□□□□ -2
SMC4-218ENST00000486711 SDHAF2Q9NX18 166 aa2.56□□□□□ -2
SMC4-218ENST00000486711 TFR2Q9UP52 801 aa2.56□□□□□ -2
SMC4-218ENST00000486711 TMEM72A0PK05 275 aa2.55□□□□□ -2
SMC4-218ENST00000486711 RAB19A4D1S5 217 aa2.55□□□□□ -2
SMC4-218ENST00000486711 PSMD11O00231 422 aa2.55□□□□□ -2
SMC4-218ENST00000486711 RNF113AO15541 343 aaKnown RBP2.55□□□□□ -2
SMC4-218ENST00000486711 LHBP01229 141 aa2.55□□□□□ -2
SMC4-218ENST00000486711 IGLV3-19P01714 112 aa2.55□□□□□ -2
SMC4-218ENST00000486711 IVLP07476 585 aa2.55□□□□□ -2
SMC4-218ENST00000486711 OR4Q2P0C623 313 aa2.55□□□□□ -2
SMC4-218ENST00000486711 CD28P10747 220 aa2.55□□□□□ -2
SMC4-218ENST00000486711 NTF3P20783 257 aa2.55□□□□□ -2
SMC4-218ENST00000486711 DSTNP60981 165 aa2.55□□□□□ -2
SMC4-218ENST00000486711 IL5RAQ01344 420 aa2.55□□□□□ -2
SMC4-218ENST00000486711 DYNC1I2Q13409 638 aaKnown RBP2.55□□□□□ -2
SMC4-218ENST00000486711 MAD2L1BPQ15013 274 aaPredicted RBP2.55□□□□□ -2
SMC4-218ENST00000486711 TOMM34Q15785 309 aaPredicted RBP2.55□□□□□ -2
SMC4-218ENST00000486711 AADACL4Q5VUY2 407 aa2.55□□□□□ -2
SMC4-218ENST00000486711 SETD3Q86TU7 594 aaPredicted RBP2.55□□□□□ -2
SMC4-218ENST00000486711 PDPNQ86YL7 162 aa2.55□□□□□ -2
SMC4-218ENST00000486711 BBS7Q8IWZ6 715 aa2.55□□□□□ -2
SMC4-218ENST00000486711 ST13P4Q8IZP2 240 aaPredicted RBP2.55□□□□□ -2
SMC4-218ENST00000486711 SYS1Q8N2H4 156 aa2.55□□□□□ -2
SMC4-218ENST00000486711 STK40Q8N2I9 435 aa2.55□□□□□ -2
SMC4-218ENST00000486711 MIR7-3HGQ8N6C7 128 aa2.55□□□□□ -2
SMC4-218ENST00000486711 ORAOV1Q8WV07 137 aa2.55□□□□□ -2
SMC4-218ENST00000486711 COPS4Q9BT78 406 aa2.55□□□□□ -2
SMC4-218ENST00000486711 SCRT1Q9BWW7 348 aa2.55□□□□□ -2
SMC4-218ENST00000486711 BEX2Q9BXY8 128 aa2.55□□□□□ -2
SMC4-218ENST00000486711 CHRNA10Q9GZZ6 450 aa2.55□□□□□ -2
SMC4-218ENST00000486711 SLC38A1Q9H2H9 487 aa2.55□□□□□ -2
SMC4-218ENST00000486711 IL37Q9NZH6 218 aa2.55□□□□□ -2
SMC4-218ENST00000486711 PRO0628Q9UI54 55 aa2.55□□□□□ -2
SMC4-218ENST00000486711 WIF1Q9Y5W5 379 aa2.55□□□□□ -2
SMC4-218ENST00000486711 DOCK8Q8NF50 2099 aa2.54□□□□□ -2
SMC4-218ENST00000486711 TUBGCP6Q96RT7 1819 aa2.54□□□□□ -2
SMC4-218ENST00000486711 A8MUU9 505 aa2.54□□□□□ -2
SMC4-218ENST00000486711 BOLA2-SMG1P6H3BVE0 249 aa2.54□□□□□ -2
SMC4-218ENST00000486711 VAPBO95292 243 aa2.54□□□□□ -2
SMC4-218ENST00000486711 SNRPAP09012 282 aaKnown RBP2.54□□□□□ -2
SMC4-218ENST00000486711 LIPCP11150 499 aa2.54□□□□□ -2
SMC4-218ENST00000486711 RANBP1P43487 201 aa2.54□□□□□ -2
SMC4-218ENST00000486711 IDH2P48735 452 aaKnown RBP2.54□□□□□ -2
SMC4-218ENST00000486711 ATP5J2P56134 94 aa2.54□□□□□ -2
SMC4-218ENST00000486711 OR12D2P58182 307 aa2.54□□□□□ -2
SMC4-218ENST00000486711 RPL10AP62906 217 aaKnown RBP2.54□□□□□ -2
SMC4-218ENST00000486711 TNNC1P63316 161 aa2.54□□□□□ -2
SMC4-218ENST00000486711 XIAPP98170 497 aa2.54□□□□□ -2
SMC4-218ENST00000486711 ATP5G2Q06055 141 aa2.54□□□□□ -2
SMC4-218ENST00000486711 FBXL19-AS1Q494R0 122 aa2.54□□□□□ -2
SMC4-218ENST00000486711 SPINT4Q6UDR6 99 aa2.54□□□□□ -2
SMC4-218ENST00000486711 UGT2A3Q6UWM9 527 aa2.54□□□□□ -2
SMC4-218ENST00000486711 CLEC19AQ6UXS0 136 aa2.54□□□□□ -2
SMC4-218ENST00000486711 NELFCDQ8IXH7 590 aa2.54□□□□□ -2
SMC4-218ENST00000486711 LYPD1Q8N2G4 141 aa2.54□□□□□ -2
SMC4-218ENST00000486711 OR2M7Q8NG81 312 aa2.54□□□□□ -2
SMC4-218ENST00000486711 OR52N1Q8NH53 320 aa2.54□□□□□ -2
SMC4-218ENST00000486711 CACNG8Q8WXS5 425 aa2.54□□□□□ -2
SMC4-218ENST00000486711 YIPF6Q96EC8 236 aa2.54□□□□□ -2
SMC4-218ENST00000486711 SMIM8Q96KF7 97 aa2.54□□□□□ -2
SMC4-218ENST00000486711 RILPQ96NA2 401 aa2.54□□□□□ -2
SMC4-218ENST00000486711 ZFP3Q96NJ6 502 aa2.54□□□□□ -2
SMC4-218ENST00000486711 METTL26Q96S19 204 aa2.54□□□□□ -2
SMC4-218ENST00000486711 CIB1Q99828 191 aa2.54□□□□□ -2
SMC4-218ENST00000486711 CTRCQ99895 268 aa2.54□□□□□ -2
SMC4-218ENST00000486711 HINT2Q9BX68 163 aa2.54□□□□□ -2
SMC4-218ENST00000486711 MARCOQ9UEW3 520 aaPredicted RBP2.54□□□□□ -2
SMC4-218ENST00000486711 RWDD2AQ9UIY3 292 aa2.54□□□□□ -2
SMC4-218ENST00000486711 ACOT9Q9Y305 439 aa2.54□□□□□ -2
SMC4-218ENST00000486711 K7EN84 100 aa2.53□□□□□ -2
SMC4-218ENST00000486711 MFNGO00587 321 aa2.53□□□□□ -2
SMC4-218ENST00000486711 APOA1P02647 267 aa2.53□□□□□ -2
SMC4-218ENST00000486711 DNASE1L1P49184 302 aa2.53□□□□□ -2
SMC4-218ENST00000486711 KRTAP10-10P60014 251 aa2.53□□□□□ -2
SMC4-218ENST00000486711 RESP18Q5W5W9 173 aa2.53□□□□□ -2
SMC4-218ENST00000486711 MORN3Q6PF18 240 aaPredicted RBP2.53□□□□□ -2
SMC4-218ENST00000486711 RBM45Q8IUH3 476 aaKnown RBP2.53□□□□□ -2
SMC4-218ENST00000486711 CCNYL1Q8N7R7 359 aa2.53□□□□□ -2
SMC4-218ENST00000486711 ZNF420Q8TAQ5 688 aaPredicted RBP2.53□□□□□ -2
SMC4-218ENST00000486711 LGALS14Q8TCE9 139 aa2.53□□□□□ -2
SMC4-218ENST00000486711 KLF14Q8TD94 323 aaPredicted RBP2.53□□□□□ -2
SMC4-218ENST00000486711 VAT1Q99536 393 aa2.53□□□□□ -2
SMC4-218ENST00000486711 PDCD1LG2Q9BQ51 273 aa2.53□□□□□ -2
SMC4-218ENST00000486711 PRORYQ9H606 182 aa2.53□□□□□ -2
SMC4-218ENST00000486711 NLE1Q9NVX2 485 aaPredicted RBP2.53□□□□□ -2
SMC4-218ENST00000486711 STMN3Q9NZ72 180 aa2.53□□□□□ -2
SMC4-218ENST00000486711 ANXA10Q9UJ72 324 aa2.53□□□□□ -2
SMC4-218ENST00000486711 TRIOBPQ9H2D6 2365 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 IGHV3OR16-8A0A075B7F1 116 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 LOC100506127A0A0U1RQW1 187 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 SLC5A10A0PJK1 596 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 C9JQL5 133 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 K7EM74 188 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 ENSAO43768 121 aaKnown RBP2.52□□□□□ -2.01
SMC4-218ENST00000486711 SC5DO75845 299 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 P2RY2P41231 377 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 HTR2BP41595 481 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 NUDT2P50583 147 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 SLC18A1P54219 525 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms