RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 POC1AQ8NBT0 407 aa12.37□□□□□ -0.43
YIF1A-208ENST00000485820 C10orf35Q96D05 121 aa12.37□□□□□ -0.43
YIF1A-208ENST00000485820 PELI1Q96FA3 418 aa12.37□□□□□ -0.43
YIF1A-208ENST00000485820 MED30Q96HR3 178 aa12.37□□□□□ -0.43
YIF1A-208ENST00000485820 DMRTB1Q96MA1 342 aa12.37□□□□□ -0.43
YIF1A-208ENST00000485820 ZNF488Q96MN9 340 aa12.37□□□□□ -0.43
YIF1A-208ENST00000485820 PCGF1Q9BSM1 259 aa12.37□□□□□ -0.43
YIF1A-208ENST00000485820 SIRPDQ9H106 197 aa12.37□□□□□ -0.43
YIF1A-208ENST00000485820 ZNF222Q9UK12 451 aa12.37□□□□□ -0.43
YIF1A-208ENST00000485820 MAB21L2Q9Y586 359 aa12.37□□□□□ -0.43
YIF1A-208ENST00000485820 TRAV40A0A0B4J280 105 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 CENPVL3A0A0U1RRI6 287 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 ANKRD65E5RJM6 399 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 TRIM77I1YAP6 450 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 SIGLEC5O15389 551 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 FADS2O95864 444 aaKnown RBP12.36□□□□□ -0.43
YIF1A-208ENST00000485820 UBCP0CG48 685 aaKnown RBP12.36□□□□□ -0.43
YIF1A-208ENST00000485820 PGA5P0DJD9 388 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 MPZP25189 248 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 GABRA2P47869 451 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 CCR9P51686 369 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 IL13RA1P78552 427 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 RAB40BQ12829 278 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 SMN1Q16637 294 aaKnown RBP12.36□□□□□ -0.43
YIF1A-208ENST00000485820 LRRC10Q5BKY1 277 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 TMEM244Q5VVB8 128 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 ACP7Q6ZNF0 438 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 ZNF555Q8NEP9 628 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 OR52I1Q8NGK6 324 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 C8orf46Q8TAG6 207 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 C4orf36Q96KX1 117 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 C1orf147Q96MC9 270 aaPredicted RBP12.36□□□□□ -0.43
YIF1A-208ENST00000485820 DCTN5Q9BTE1 182 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 ISG20L2Q9H9L3 353 aaKnown RBP12.36□□□□□ -0.43
YIF1A-208ENST00000485820 ERVK13-1Q9NX77 482 aa12.36□□□□□ -0.43
YIF1A-208ENST00000485820 RPL36Q9Y3U8 105 aaKnown RBP12.36□□□□□ -0.43
YIF1A-208ENST00000485820 IGKV1-27A0A075B6S5 117 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 LOC107986453A0A1B0GWG9 222 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 FAM230AA0A1W2PPH8 454 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 RFPL4AA6NLU0 287 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 OR4C45A6NMZ5 311 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 RFPL4AL1F8VTS6 287 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 CLIC3O95833 236 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 CAV3P56539 151 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 BPIFB3P59826 476 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 ERVK11-1P61568 191 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 UBA52P62987 128 aaKnown RBP12.35□□□□□ -0.43
YIF1A-208ENST00000485820 RCN1Q15293 331 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 ZNF691Q5VV52 312 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 METTL11BQ5VVY1 283 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 RBMS3Q6XE24 437 aaKnown RBP12.35□□□□□ -0.43
YIF1A-208ENST00000485820 BRD3OSQ6XYD6 125 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 SYS1Q8N2H4 156 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 ZNRF1Q8ND25 227 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 TRMT10AQ8TBZ6 339 aaKnown RBP12.35□□□□□ -0.43
YIF1A-208ENST00000485820 ADAT3Q96EY9 351 aaPredicted RBP12.35□□□□□ -0.43
YIF1A-208ENST00000485820 SDSLQ96GA7 329 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 NRIP2Q9BQI9 281 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 ALG8Q9BVK2 526 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 PKIBQ9C010 78 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 CHST5Q9GZS9 411 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 PRDM13Q9H4Q3 707 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 PLEKHA1Q9HB21 404 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 HES4Q9HCC6 221 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 INPP5EQ9NRR6 644 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 SLC25A10Q9UBX3 287 aaPredicted RBP12.35□□□□□ -0.43
YIF1A-208ENST00000485820 SLC7A11Q9UPY5 501 aa12.35□□□□□ -0.43
YIF1A-208ENST00000485820 IGKV1-9A0A0C4DH69 117 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 NKX6-3A6NJ46 265 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 E9PI62 339 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 SERPINA3P01011 423 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 HTR1AP08908 422 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 FUT6P51993 359 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 ACTA2P62736 377 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 ACTG2P63267 376 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 ADARB1P78563 741 aaKnown RBP12.34□□□□□ -0.43
YIF1A-208ENST00000485820 IL24Q13007 206 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 ALKBH1Q13686 389 aaKnown RBP12.34□□□□□ -0.43
YIF1A-208ENST00000485820 PDCD1Q15116 288 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 KLHL22Q53GT1 634 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 GPR157Q5UAW9 335 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 CD177Q8N6Q3 437 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 PACRGLQ8N7B6 248 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 OR10AC1Q8NH08 325 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 NPRL2Q8WTW4 380 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 PP6455Q8WZ26 134 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 FGGYQ96C11 551 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 FGF20Q9NP95 211 aaPredicted RBP12.34□□□□□ -0.43
YIF1A-208ENST00000485820 C8orf4Q9NR00 106 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 POLDIP2Q9Y2S7 368 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 KPTNQ9Y664 436 aa12.34□□□□□ -0.43
YIF1A-208ENST00000485820 TMEM89A2RUT3 159 aa12.33□□□□□ -0.44
YIF1A-208ENST00000485820 GATBO75879 557 aaKnown RBP12.33□□□□□ -0.44
YIF1A-208ENST00000485820 LIMS3P0CW19 117 aa12.33□□□□□ -0.44
YIF1A-208ENST00000485820 LIMS4P0CW20 117 aa12.33□□□□□ -0.44
YIF1A-208ENST00000485820 PRTN3P24158 256 aa12.33□□□□□ -0.44
YIF1A-208ENST00000485820 PEX2P28328 305 aa12.33□□□□□ -0.44
YIF1A-208ENST00000485820 PRDX2P32119 198 aa12.33□□□□□ -0.44
YIF1A-208ENST00000485820 DEFB112Q30KQ8 113 aa12.33□□□□□ -0.44
YIF1A-208ENST00000485820 TTC23Q5W5X9 447 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms