RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 KMT2CQ8NEZ4 4911 aaKnown RBP10.59□□□□□ -0.71
HDAC6-227ENST00000485102 OR2AT4A6NND4 320 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 H0YAE9 185 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 GYPBP06028 91 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 HSD11B1P28845 292 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 LOXL3P58215 753 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 EIF2B1Q14232 305 aaKnown RBP10.58□□□□□ -0.72
HDAC6-227ENST00000485102 SLX4IPQ5VYV7 408 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 FAM57BQ71RH2 274 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 SHFQ7M4L6 423 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 GID4Q8IVV7 300 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 Q8N2B8 174 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 PIFOQ8TCI5 191 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 C17orf50Q8WW18 174 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 RPL3LQ92901 407 aaKnown RBP10.58□□□□□ -0.72
HDAC6-227ENST00000485102 SDSLQ96GA7 329 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 HRASLS5Q96KN8 279 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 NPFFR1Q9GZQ6 430 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 RIBC2Q9H4K1 309 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 SNTG1Q9NSN8 517 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 NLKQ9UBE8 527 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 ZNF222Q9UK12 451 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 FOXJ3Q9UPW0 622 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 HSPE1-MOB4S4R3N1 261 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 NBEAL2Q6ZNJ1 2754 aa10.58□□□□□ -0.72
HDAC6-227ENST00000485102 IGKV1D-17A0A075B6S4 117 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 A0A1W2PQ09 198 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 VGLL3A8MV65 326 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 SLC16A6O15403 523 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 AKR7A2O43488 359 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 ATP6V1G2O95670 118 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 CLUP10909 449 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 NDUFB7P17568 137 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 ACKR3P25106 362 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 PRDX4Q13162 271 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 DHRSXQ8N5I4 330 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 C11orf42Q8N5U0 333 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 OR4S1Q8NGB4 309 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 OR6K6Q8NGW6 343 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 OR4Q3Q8NH05 313 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 WIPF2Q8TF74 440 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-227ENST00000485102 HPSE2Q8WWQ2 592 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 RNF170Q96K19 258 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 INTS14Q96SY0 518 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 FGF23Q9GZV9 251 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-227ENST00000485102 Q9H521 79 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 HEXA-AS1Q9H8Q6 139 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 NECAP2Q9NVZ3 263 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 TVP23BQ9NYZ1 205 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 GMPPBQ9Y5P6 360 aa10.57□□□□□ -0.72
HDAC6-227ENST00000485102 LOC100130705A0A1B0GUX0 176 aa10.56□□□□□ -0.72
HDAC6-227ENST00000485102 FAM90A8PA6NJQ4 464 aa10.56□□□□□ -0.72
HDAC6-227ENST00000485102 ZNF850A8MQ14 1090 aa10.56□□□□□ -0.72
HDAC6-227ENST00000485102 PRB2P02812 416 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-227ENST00000485102 PSG2P11465 335 aa10.56□□□□□ -0.72
HDAC6-227ENST00000485102 GLRA1P23415 457 aa10.56□□□□□ -0.72
HDAC6-227ENST00000485102 SLC25A30Q5SVS4 291 aa10.56□□□□□ -0.72
HDAC6-227ENST00000485102 NXNL2Q5VZ03 156 aa10.56□□□□□ -0.72
HDAC6-227ENST00000485102 C12orf73Q69YU5 71 aa10.56□□□□□ -0.72
HDAC6-227ENST00000485102 TIGD4Q8IY51 512 aa10.56□□□□□ -0.72
HDAC6-227ENST00000485102 ZNRF1Q8ND25 227 aa10.56□□□□□ -0.72
HDAC6-227ENST00000485102 RORBQ92753 470 aa10.56□□□□□ -0.72
HDAC6-227ENST00000485102 PGAM5Q96HS1 289 aa10.56□□□□□ -0.72
HDAC6-227ENST00000485102 MNTQ99583 582 aa10.56□□□□□ -0.72
HDAC6-227ENST00000485102 OR51I2Q9H344 312 aa10.56□□□□□ -0.72
HDAC6-227ENST00000485102 NIPAL2Q9H841 368 aa10.56□□□□□ -0.72
HDAC6-227ENST00000485102 RASL12Q9NYN1 266 aa10.56□□□□□ -0.72
HDAC6-227ENST00000485102 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.56□□□□□ -0.72
HDAC6-227ENST00000485102 A0A1W2PPH5 198 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 IRGMA1A4Y4 181 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 ANGPTL7O43827 346 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 GLCEO94923 617 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 PEX2P28328 305 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 GSTT1P30711 240 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 VHLP40337 213 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 GNG3P63215 75 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 LY6EQ16553 131 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 OXLD1Q5BKU9 147 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 NDUFA11Q86Y39 141 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 CALHM1Q8IU99 346 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 ZDHHC23Q8IYP9 409 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 C11orf44Q8N8P7 122 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 ZNF454Q8N9F8 522 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 WFDC9Q8NEX5 89 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 OR4F17Q8NGA8 305 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 OR6N2Q8NGY6 317 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 OTOSQ8NHW6 89 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 ZNF671Q8TAW3 534 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 TMEM163Q8TC26 289 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 MRAPQ8TCY5 172 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 PIGCQ92535 297 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 MRPL48Q96GC5 212 aaKnown RBP10.55□□□□□ -0.72
HDAC6-227ENST00000485102 OR4F4Q96R69 305 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 AMELYQ99218 206 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 SERTAD4Q9NUC0 356 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 DNAJC27Q9NZQ0 273 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 WARS2Q9UGM6 360 aaKnown RBP10.55□□□□□ -0.72
HDAC6-227ENST00000485102 TMEM14AQ9Y6G1 99 aa10.55□□□□□ -0.72
HDAC6-227ENST00000485102 hCG_1809904A0A1W2PP81 198 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 A0A1W2PPE2 198 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms