RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ZFAND2BQ8WV99 257 aa10.14□□□□□ -0.79
MSH5-216ENST00000484309 LHX4Q969G2 390 aa10.14□□□□□ -0.79
MSH5-216ENST00000484309 C4orf36Q96KX1 117 aa10.14□□□□□ -0.79
MSH5-216ENST00000484309 SLC25A10Q9UBX3 287 aaPredicted RBP10.14□□□□□ -0.79
MSH5-216ENST00000484309 EXOGQ9Y2C4 368 aaKnown RBP10.14□□□□□ -0.79
MSH5-216ENST00000484309 MYRFQ9Y2G1 1151 aa10.14□□□□□ -0.79
MSH5-216ENST00000484309 SNTNA6NMZ2 147 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 SIGLEC5O15389 551 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 CLIC3O95833 236 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 ECDO95905 644 aaPredicted RBP10.13□□□□□ -0.79
MSH5-216ENST00000484309 LIPFP07098 398 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 HTR1AP08908 422 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 ACAA1P09110 424 aaPredicted RBP10.13□□□□□ -0.79
MSH5-216ENST00000484309 UBCP0CG48 685 aaKnown RBP10.13□□□□□ -0.79
MSH5-216ENST00000484309 RCN1Q15293 331 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 UBE2V2Q15819 145 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 SMN1Q16637 294 aaKnown RBP10.13□□□□□ -0.79
MSH5-216ENST00000484309 TUSC1Q2TAM9 212 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 DEFB112Q30KQ8 113 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 ATPAF1Q5TC12 328 aaPredicted RBP10.13□□□□□ -0.79
MSH5-216ENST00000484309 C12orf54Q6X4T0 127 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 ACP7Q6ZNF0 438 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 Q6ZSR3 168 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 VMO1Q7Z5L0 202 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 ZNF573Q86YE8 665 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 ACBD7Q8N6N7 88 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 POC1AQ8NBT0 407 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 ZNRF1Q8ND25 227 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 ZNF555Q8NEP9 628 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 OR10AC1Q8NH08 325 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 RHOXF1Q8NHV9 184 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 FAM216AQ8WUB2 273 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 APH1BQ8WW43 257 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 TAF15Q92804 592 aaKnown RBP eCLIP10.13□□□□□ -0.79
MSH5-216ENST00000484309 ITFG2Q969R8 447 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 DCTN5Q9BTE1 182 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 ALG8Q9BVK2 526 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 CNTD2Q9H8S5 307 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 ISG20L2Q9H9L3 353 aaKnown RBP10.13□□□□□ -0.79
MSH5-216ENST00000484309 SIRT7Q9NRC8 400 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 TNFRSF19Q9NS68 423 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 SMPD3Q9NY59 655 aaPredicted RBP10.13□□□□□ -0.79
MSH5-216ENST00000484309 FRRS1LQ9P0K9 344 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 OR14J1Q9UGF5 321 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 ZNF222Q9UK12 451 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 MAB21L2Q9Y586 359 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 ANK2Q01484 3957 aa10.13□□□□□ -0.79
MSH5-216ENST00000484309 IGKV1-27A0A075B6S5 117 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 CENPVL3A0A0U1RRI6 287 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 A0A1W2PQ09 198 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 RFPL4AA6NLU0 287 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 DHRS7CA6NNS2 312 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 RFPL4AL1F8VTS6 287 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 MPZL2O60487 215 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 NXPH2O95156 264 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 PGA5P0DJD9 388 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 PEX2P28328 305 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 CAPZA1P52907 286 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 SMIM21Q3B7S5 101 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 C9orf139Q6ZV77 190 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 CD177Q8N6Q3 437 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 CYGBQ8WWM9 190 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 GCDHQ92947 438 aaPredicted RBP10.12□□□□□ -0.79
MSH5-216ENST00000484309 ADAT3Q96EY9 351 aaPredicted RBP10.12□□□□□ -0.79
MSH5-216ENST00000484309 PELI1Q96FA3 418 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 MED30Q96HR3 178 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 Q96MT0 163 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 CHST5Q9GZS9 411 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 DNTTIP1Q9H147 329 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 SLC7A11Q9UPY5 501 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 PCDHGB1Q9Y5G3 927 aa10.12□□□□□ -0.79
MSH5-216ENST00000484309 A0A1W2PRD5 423 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 A0A1W2PRF3 423 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 A0A1W2PRM7 423 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 F8VVB4 439 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 F8VWA3 439 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 WBP4O75554 376 aaKnown RBP10.11□□□□□ -0.79
MSH5-216ENST00000484309 GATBO75879 557 aaKnown RBP10.11□□□□□ -0.79
MSH5-216ENST00000484309 ZNF20P17024 532 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 PRTN3P24158 256 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 ACTA2P62736 377 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 ACTG2P63267 376 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 KLRD1Q13241 179 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 SLC9A3R2Q15599 337 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 TMEM244Q5VVB8 128 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 KCTD20Q7Z5Y7 419 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 FAM185AQ8N0U4 392 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 LY6G5BQ8NDX9 201 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 OR51A4Q8NGJ6 313 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 OR52I1Q8NGK6 324 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 CNIH3Q8TBE1 160 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 ZDHHC16Q969W1 377 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 SLAMF9Q96A28 289 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 FGGYQ96C11 551 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 BORCS8Q96FH0 119 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 NRIP2Q9BQI9 281 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 ERVK13-1Q9NX77 482 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 RASL12Q9NYN1 266 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 POLDIP2Q9Y2S7 368 aa10.11□□□□□ -0.79
MSH5-216ENST00000484309 IGHV1-69DA0A0B4J2H0 117 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms