RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 PDCD1LG2Q9BQ51 273 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 NRIP2Q9BQI9 281 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 CDCA4Q9BXL8 241 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 RASL12Q9NYN1 266 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 OR5V1Q9UGF6 321 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 SONP18583 2426 aaKnown RBP13.23□□□□□ -0.29
UPF3A-208ENST00000484246 A6NIN4 97 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 LALBAP00709 142 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 ZNF20P17024 532 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 ATF1P18846 271 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 PRKACBP22694 351 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 HAAOP46952 286 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 GNB2P62879 340 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 LCN2P80188 198 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 BDH1Q02338 343 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 LYPD2Q6UXB3 125 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 OR13C3Q8NGS6 347 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 ANGPTL6Q8NI99 470 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 FGGYQ96C11 551 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 KCTD12Q96CX2 325 aaKnown RBP13.23□□□□□ -0.29
UPF3A-208ENST00000484246 BEX2Q9BXY8 128 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 TMPRSS13Q9BYE2 586 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 DUSP21Q9H596 190 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 HES4Q9HCC6 221 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 SCN3BQ9NY72 215 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 CLN8Q9UBY8 286 aa13.23□□□□□ -0.29
UPF3A-208ENST00000484246 SIRT4Q9Y6E7 314 aaPredicted RBP13.23□□□□□ -0.29
UPF3A-208ENST00000484246 IGKV1-27A0A075B6S5 117 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 TRAPPC2LH3BP13 241 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 H3BSH0 61 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 MYL12BO14950 172 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 PHF1O43189 567 aaPredicted RBP13.22□□□□□ -0.29
UPF3A-208ENST00000484246 AKR7A2O43488 359 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 ADAM20O43506 726 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 GYPAP02724 150 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 CD1AP06126 327 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 AMY2BP19961 511 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 WNT4P56705 351 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 ERVK11-1P61568 191 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 ACSM1Q08AH1 577 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 DMRTC1Q5HYR2 192 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 DCAF12L2Q5VW00 463 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 ZNF529Q6P280 563 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 LHFPL2Q6ZUX7 228 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 SLC36A1Q7Z2H8 476 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 CALHM1Q8IU99 346 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 NANOGP1Q8N7R0 232 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 GPR148Q8TDV2 347 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 MYDGFQ969H8 173 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 PGLYRP3Q96LB9 341 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 WDR13Q9H1Z4 485 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 PAK1IP1Q9NWT1 392 aaPredicted RBP13.22□□□□□ -0.29
UPF3A-208ENST00000484246 NLKQ9UBE8 527 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 ZNF222Q9UK12 451 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 TPRKBQ9Y3C4 175 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 PCDHGB5Q9Y5G0 923 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 INSIG2Q9Y5U4 225 aa13.22□□□□□ -0.29
UPF3A-208ENST00000484246 IGHV3OR15-7A0A075B7D8 119 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 IGHV2-70DA0A0C4DH43 119 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 SYNGR1O43759 233 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 FSHBP01225 129 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 PPIAL4GP0DN37 164 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 GLRA1P23415 457 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 CRHBPP24387 322 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 AZGP1P25311 298 aaKnown RBP13.21□□□□□ -0.29
UPF3A-208ENST00000484246 RBP2P50120 134 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 IRF3Q14653 427 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 SMIM21Q3B7S5 101 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 ZNF788Q6ZQV5 615 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 SERPINA12Q8IW75 414 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 TRMT10AQ8TBZ6 339 aaKnown RBP13.21□□□□□ -0.29
UPF3A-208ENST00000484246 GATAD2BQ8WXI9 593 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 TMIGD2Q96BF3 282 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 BORCS8Q96FH0 119 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 DMRTB1Q96MA1 342 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 OPALINQ96PE5 141 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 ZNF184Q99676 751 aaPredicted RBP13.21□□□□□ -0.29
UPF3A-208ENST00000484246 MND1Q9BWT6 205 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 ZCCHC4Q9H5U6 513 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 NEK6Q9HC98 313 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 SMURF1Q9HCE7 757 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 MMP26Q9NRE1 261 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 DNAJB11Q9UBS4 358 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 OPN4Q9UHM6 478 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 DHDHQ9UQ10 334 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 ERGIC3Q9Y282 383 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 ZNF281Q9Y2X9 895 aa13.21□□□□□ -0.29
UPF3A-208ENST00000484246 MALRD1Q5VYJ5 2156 aa13.2□□□□□ -0.3
UPF3A-208ENST00000484246 TRBV5-5A0A0J9YX44 114 aa13.2□□□□□ -0.3
UPF3A-208ENST00000484246 FAM230AA0A1W2PPH8 454 aa13.2□□□□□ -0.3
UPF3A-208ENST00000484246 NKX6-3A6NJ46 265 aa13.2□□□□□ -0.3
UPF3A-208ENST00000484246 OR2AT4A6NND4 320 aa13.2□□□□□ -0.3
UPF3A-208ENST00000484246 TMPRSS2O15393 492 aa13.2□□□□□ -0.3
UPF3A-208ENST00000484246 FCN3O75636 299 aa13.2□□□□□ -0.3
UPF3A-208ENST00000484246 ECDO95905 644 aaPredicted RBP13.2□□□□□ -0.3
UPF3A-208ENST00000484246 CD2P06729 351 aa13.2□□□□□ -0.3
UPF3A-208ENST00000484246 SRD5A1P18405 259 aa13.2□□□□□ -0.3
UPF3A-208ENST00000484246 PAX8Q06710 450 aa13.2□□□□□ -0.3
UPF3A-208ENST00000484246 YIF1BQ5BJH7 314 aa13.2□□□□□ -0.3
UPF3A-208ENST00000484246 CD276Q5ZPR3 534 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms