RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 LYZL4Q96KX0 146 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 COPS7AQ9UBW8 275 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 PADI1Q9ULC6 663 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 RCL1Q9Y2P8 373 aaKnown RBP17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 SLC34A2O95436 690 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 RPS10P46783 165 aaKnown RBP17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 VEGFBP49765 207 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 ASCL1P50553 236 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 GABREP78334 506 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 CLINT1Q14677 625 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 THEM4Q5T1C6 240 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 TSPO2Q5TGU0 170 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 PFDN5Q99471 154 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 C8orf33Q9H7E9 229 aaPredicted RBP17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 CNTRLQ7Z7A1 2325 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 ASXL3Q9C0F0 2248 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 BORCS7-ASMTA0A0B4J1R7 106 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 IGHV3-20A0A0C4DH32 117 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 ANKUB1A6NFN9 424 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 SERPINE3A8MV23 424 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 LY86O95711 162 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 KLK3P07288 261 aaPredicted RBP17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 GPX4P36969 197 aaPredicted RBP17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 PIGPP57054 158 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 FAM189A2Q15884 450 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 DOK3Q7L591 496 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 APCDD1LQ8NCL9 501 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 MUCL1Q96DR8 90 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 TREM2Q9NZC2 230 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 COL5A1P20908 1838 aaPredicted RBP17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 FER1L5A0AVI2 2057 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 ZNF43P17038 809 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 CLRN1P58418 232 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 UBE2V2Q15819 145 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 ST8SIA1Q92185 356 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 DECR2Q9NUI1 292 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 ZNF581Q9P0T4 197 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 EYSQ5T1H1 3165 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 SHANK1Q9Y566 2161 aa17.29■□□□□ 0.36
RPUSD3-216ENST00000484134 C10orf142B7Z368 130 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 GPR137BO60478 399 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 OR5AC1P0C628 307 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 PGA4P0DJD7 388 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 PGA3P0DJD8 388 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 CDX1P47902 265 aaPredicted RBP17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 RRADP55042 308 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 RAB1AP62820 205 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 TMEM187Q14656 261 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 RSPO4Q2I0M5 234 aaPredicted RBP17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 SOHLH1Q5JUK2 328 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 TMEM182Q6ZP80 229 aaPredicted RBP17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 SHISA6Q6ZSJ9 500 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 ZNF283Q8N7M2 679 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 OR52M1Q8NGK5 317 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 FAM213BQ8TBF2 198 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 PHOSPHO2Q8TCD6 241 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 THAP3Q8WTV1 239 aaPredicted RBP17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 ABHD14AQ9BUJ0 271 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 CHST5Q9GZS9 411 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 PPP4R1LQ9P1A2 415 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 RHPN2P1A8MT19 583 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 GPR37O15354 613 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 RRP8O43159 456 aaKnown RBP17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 FOSL2P15408 326 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 ALDH3B1P43353 468 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 NDUFA6P56556 154 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 MARS2Q96GW9 593 aaKnown RBP17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 JSRP1Q96MG2 331 aaPredicted RBP17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 VN1R1Q9GZP7 353 aa17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 ELL3Q9HB65 397 aaPredicted RBP17.28■□□□□ 0.36
RPUSD3-216ENST00000484134 ZNF814B7Z6K7 855 aa17.27■□□□□ 0.36
RPUSD3-216ENST00000484134 GABRR1P24046 479 aa17.27■□□□□ 0.36
RPUSD3-216ENST00000484134 ZNF343Q6P1L6 599 aa17.27■□□□□ 0.36
RPUSD3-216ENST00000484134 HIST2H3AQ71DI3 136 aa17.27■□□□□ 0.36
RPUSD3-216ENST00000484134 ZNF383Q8NA42 475 aa17.27■□□□□ 0.36
RPUSD3-216ENST00000484134 TOMM40LQ969M1 308 aa17.27■□□□□ 0.36
RPUSD3-216ENST00000484134 DDIT4LQ96D03 193 aa17.27■□□□□ 0.36
RPUSD3-216ENST00000484134 PBDC1Q9BVG4 233 aa17.27■□□□□ 0.36
RPUSD3-216ENST00000484134 TM2D1Q9BX74 207 aa17.27■□□□□ 0.36
RPUSD3-216ENST00000484134 ALKBH4Q9NXW9 302 aa17.27■□□□□ 0.36
RPUSD3-216ENST00000484134 DOK5Q9P104 306 aa17.27■□□□□ 0.36
RPUSD3-216ENST00000484134 TLCD2A6NGC4 264 aa17.27■□□□□ 0.35
RPUSD3-216ENST00000484134 K7N7A8 449 aa17.27■□□□□ 0.35
RPUSD3-216ENST00000484134 OR5H8P0DN80 308 aa17.27■□□□□ 0.35
RPUSD3-216ENST00000484134 FCGR2AP12318 317 aa17.27■□□□□ 0.35
RPUSD3-216ENST00000484134 FASLGP48023 281 aa17.27■□□□□ 0.35
RPUSD3-216ENST00000484134 MYBPHQ13203 477 aa17.27■□□□□ 0.35
RPUSD3-216ENST00000484134 C1orf189Q5VU69 101 aa17.27■□□□□ 0.35
RPUSD3-216ENST00000484134 NOXO1Q8NFA2 376 aa17.27■□□□□ 0.35
RPUSD3-216ENST00000484134 GPR27Q9NS67 375 aa17.27■□□□□ 0.35
RPUSD3-216ENST00000484134 STRAPQ9Y3F4 350 aaKnown RBP17.27■□□□□ 0.35
RPUSD3-216ENST00000484134 TMEM225BP0DP42 221 aa17.26■□□□□ 0.35
RPUSD3-216ENST00000484134 CHATP28329 748 aa17.26■□□□□ 0.35
RPUSD3-216ENST00000484134 SMAD4Q13485 552 aaKnown RBP17.26■□□□□ 0.35
RPUSD3-216ENST00000484134 SLC25A47Q6Q0C1 308 aa17.26■□□□□ 0.35
RPUSD3-216ENST00000484134 SUMF2Q8NBJ7 301 aa17.26■□□□□ 0.35
RPUSD3-216ENST00000484134 ANXA10Q9UJ72 324 aa17.26■□□□□ 0.35
RPUSD3-216ENST00000484134 A0A1W2PNV4 684 aa17.26■□□□□ 0.35
RPUSD3-216ENST00000484134 CXCL1P09341 107 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms