RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	HTR2B	P41595	481 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	DNASE1L1	P49184	302 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	NUDT2	P50583	147 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	FABP6	P51161	128 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	TAS2R46	P59540	309 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR2B8P	P59922	312 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	TSPAN5	P62079	268 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	RPS15A	P62244	130 aa	Known RBP	0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	VSNL1	P62760	191 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	IRF8	Q02556	426 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	BIK	Q13323	160 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	DGCR6	Q14129	220 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	ZNF266	Q14584	549 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	MAPRE2	Q15555	327 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	GABRA6	Q16445	453 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	RPEL1	Q2QD12	228 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173		Q3ZCU0	254 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	LUZP6	Q538Z0	58 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	C6orf183	Q5T699	404 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	IDNK	Q5T6J7	187 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	CPTP	Q5TA50	214 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	MFSD14C	Q5VZR4	134 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	UGT2A3	Q6UWM9	527 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173		Q6ZSR6	202 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	FAM122B	Q7Z309	247 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	RBM45	Q8IUH3	476 aa	Known RBP	0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	TCAIM	Q8N3R3	496 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	KIF2B	Q8N4N8	673 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	WDR31	Q8NA23	367 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	GPR26	Q8NDV2	337 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	C19orf18	Q8NEA5	215 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR56A4	Q8NGH8	313 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	ZFAND1	Q8TCF1	268 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	SFXN5	Q8TD22	340 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	TCP10L	Q8TDR4	215 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	CDKL2	Q92772	493 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	RPE	Q96AT9	228 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	PPWD1	Q96BP3	646 aa	Known RBP	0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	MRPL48	Q96GC5	212 aa	Known RBP	0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	CENPN	Q96H22	339 aa	Predicted RBP	0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	ATP6V1G3	Q96LB4	118 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	FBXO44	Q9H4M3	255 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	ZNF442	Q9H7R0	627 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	REEP1	Q9H902	201 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	ANKH	Q9HCJ1	492 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	AGPAT3	Q9NRZ7	376 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	RGS18	Q9NS28	235 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	NLE1	Q9NVX2	485 aa	Predicted RBP	0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	ZNHIT6	Q9NWK9	470 aa	Known RBP	0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	CFAP45	Q9UL16	551 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	RHBDD3	Q9Y3P4	386 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173		V9GYY9	64 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	SBNO1	A3KN83	1393 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	KIAA1671	Q9BY89	1806 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	RPRD2	Q5VT52	1461 aa	Known RBP	0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	MROH7	Q68CQ1	1323 aa		0.9	□□□□□ -2.26
CCNL1-223	ENST00000481173	FHOD3	Q2V2M9	1422 aa		0.9	□□□□□ -2.26
CCNL1-223	ENST00000481173	ERICH4	A6NGS2	130 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	NCBP2L	A6PVI3	153 aa	Known RBP	0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	CENPBD1	B2RD01	187 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	HSBP1L1	C9JCN9	74 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173		K7EMT4	169 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173		M0QX08	132 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	TNFRSF11B	O00300	401 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	GABRP	O00591	440 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	RFXANK	O14593	260 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	ZBTB5	O15062	677 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	ERI3	O43414	337 aa	Known RBP	0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	KDELR3	O43731	214 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	NMT2	O60551	498 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	SERPINB7	O75635	380 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	YEATS4	O95619	227 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	CAT	P04040	527 aa	Known RBP	0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	MMP7	P09237	267 aa	Predicted RBP	0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	TACSTD2	P09758	323 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	OR5AL1	P0C617	328 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	PGA5	P0DJD9	388 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	ATF6	P18850	670 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	PRSS3	P35030	304 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	FUS	P35637	526 aa	Known RBP eCLIP	0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	POLR2I	P36954	125 aa	Known RBP	0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	GPR4	P46093	362 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	HCCS	P53701	268 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	MTPN	P58546	118 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	ATP6V0D1	P61421	351 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	PAFAH1B2	P68402	229 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	SLC35A1	P78382	337 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	ELF3	P78545	371 aa	Predicted RBP	0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	PRR3	P79522	188 aa	Known RBP	0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	RPL18A	Q02543	176 aa	Known RBP	0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	ADIG	Q0VDE8	80 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	SLC9A3R2	Q15599	337 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	TSC22D1	Q15714	1073 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	SLC25A35	Q3KQZ1	300 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	CDNF	Q49AH0	187 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	ATP6AP1L	Q52LC2	224 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	SYT6	Q5T7P8	510 aa	Predicted RBP	0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	ERICH5	Q6P6B1	374 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	CD300LG	Q6UXG3	332 aa		0.9	□□□□□ -2.27
CCNL1-223	ENST00000481173	DAZ4	Q86SG3	579 aa	Known RBP	0.9	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms