RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 PPP1R14AQ96A00 147 aa7.48□□□□□ -1.21
DDX56-211ENST00000479602 FOXRED1Q96CU9 486 aaPredicted RBP7.48□□□□□ -1.21
DDX56-211ENST00000479602 UQCC2Q9BRT2 126 aa7.48□□□□□ -1.21
DDX56-211ENST00000479602 CCDC90BQ9GZT6 254 aa7.48□□□□□ -1.21
DDX56-211ENST00000479602 FGF23Q9GZV9 251 aaPredicted RBP7.48□□□□□ -1.21
DDX56-211ENST00000479602 HES4Q9HCC6 221 aa7.48□□□□□ -1.21
DDX56-211ENST00000479602 BRD7Q9NPI1 651 aa7.48□□□□□ -1.21
DDX56-211ENST00000479602 DECR2Q9NUI1 292 aa7.48□□□□□ -1.21
DDX56-211ENST00000479602 TMEM106BQ9NUM4 274 aa7.48□□□□□ -1.21
DDX56-211ENST00000479602 RASL12Q9NYN1 266 aa7.48□□□□□ -1.21
DDX56-211ENST00000479602 KAAG1Q9UBP8 84 aa7.48□□□□□ -1.21
DDX56-211ENST00000479602 CKLFQ9UBR5 152 aa7.48□□□□□ -1.21
DDX56-211ENST00000479602 GHRLQ9UBU3 117 aa7.48□□□□□ -1.21
DDX56-211ENST00000479602 FZR1Q9UM11 496 aa7.48□□□□□ -1.21
DDX56-211ENST00000479602 SLC7A11Q9UPY5 501 aa7.48□□□□□ -1.21
DDX56-211ENST00000479602 PPP1R3CQ9UQK1 317 aa7.48□□□□□ -1.21
DDX56-211ENST00000479602 POLR3KQ9Y2Y1 108 aaPredicted RBP7.48□□□□□ -1.21
DDX56-211ENST00000479602 WNK2Q9Y3S1 2297 aa7.48□□□□□ -1.21
DDX56-211ENST00000479602 PPIAL4EA0A075B759 164 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 PPIAL4CA0A0B4J2A2 164 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 ZNF850A8MQ14 1090 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 CLDN25C9JDP6 229 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 PPIAL4DF5H284 164 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 TMEM178BH3BS89 294 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 RGS9O75916 674 aaPredicted RBP7.47□□□□□ -1.21
DDX56-211ENST00000479602 INMTO95050 263 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 IGHV2-70P01814 119 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 HPXP02790 462 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 PGA5P0DJD9 388 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 PPIAL4FP0DN26 164 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 RAB3AP20336 220 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 AZGP1P25311 298 aaKnown RBP7.47□□□□□ -1.21
DDX56-211ENST00000479602 TGFBR2P37173 567 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 MAGEB1P43366 347 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 ALDH3B2P48448 385 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 PSMD7P51665 324 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 GP2P55259 537 aaKnown RBP7.47□□□□□ -1.21
DDX56-211ENST00000479602 ZP1P60852 638 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 CCL8P80075 99 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 PAX5Q02548 391 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 KCNJ8Q15842 424 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 TUSC1Q2TAM9 212 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 HFEQ30201 348 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 GFOD2Q3B7J2 385 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 ATPAF1Q5TC12 328 aaPredicted RBP7.47□□□□□ -1.21
DDX56-211ENST00000479602 LIPKQ5VXJ0 399 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 WDR82Q6UXN9 313 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 TMEM91Q6ZNR0 172 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 C11orf53Q8IXP5 236 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 LINC01356Q8N9X3 169 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 POC1AQ8NBT0 407 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 BHLHE23Q8NDY6 225 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 OR10AD1Q8NGE0 317 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 OR13F1Q8NGS4 319 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 OR11L1Q8NGX0 322 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 TSEN15Q8WW01 171 aaKnown RBP7.47□□□□□ -1.21
DDX56-211ENST00000479602 ITLN1Q8WWA0 313 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 AQP3Q92482 292 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 TIMD4Q96H15 378 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 HIST1H2AAQ96QV6 131 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 VRK1Q99986 396 aaPredicted RBP7.47□□□□□ -1.21
DDX56-211ENST00000479602 NRIP2Q9BQI9 281 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 METTL17Q9H7H0 456 aaPredicted RBP7.47□□□□□ -1.21
DDX56-211ENST00000479602 FBLN5Q9UBX5 448 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 STUB1Q9UNE7 303 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 GTF2A1LQ9UNN4 478 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 CMYA5Q8N3K9 4069 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 DYSFO75923 2080 aa7.47□□□□□ -1.21
DDX56-211ENST00000479602 A8MXK9 166 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 F5H0A9 414 aaPredicted RBP7.46□□□□□ -1.22
DDX56-211ENST00000479602 F5H5P2 479 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 GABRPO00591 440 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 TNFRSF13BO14836 293 aaPredicted RBP7.46□□□□□ -1.22
DDX56-211ENST00000479602 GPR37O15354 613 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 PIN1P1O15428 100 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 TPD52L2O43399 206 aaKnown RBP7.46□□□□□ -1.22
DDX56-211ENST00000479602 ZNF780AO75290 641 aaPredicted RBP7.46□□□□□ -1.22
DDX56-211ENST00000479602 TFAP2AP05549 437 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 UBBP0CG47 229 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 COL8A2P25067 703 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 MDH2P40926 338 aaKnown RBP7.46□□□□□ -1.22
DDX56-211ENST00000479602 MAP2K4P45985 399 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 COMPP49747 757 aaPredicted RBP7.46□□□□□ -1.22
DDX56-211ENST00000479602 ATP1B3P54709 279 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 DVL1P1P54792 670 aaPredicted RBP7.46□□□□□ -1.22
DDX56-211ENST00000479602 PRSS12P56730 875 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 LMO4P61968 165 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 PPP3R1P63098 170 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 ACSM3Q53FZ2 586 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 C1orf100Q5SVJ3 147 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 PLCXD3Q63HM9 321 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 KCTD8Q6ZWB6 473 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 TPRA1Q86W33 373 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 RDH10Q8IZV5 341 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 GCSAMQ8N6F7 178 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 ZNF671Q8TAW3 534 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 ZFAND2BQ8WV99 257 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 PIGCQ92535 297 aa7.46□□□□□ -1.22
DDX56-211ENST00000479602 GTF3AQ92664 365 aaKnown RBP7.46□□□□□ -1.22
DDX56-211ENST00000479602 RAB1CQ92928 201 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms