RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 BDH1Q02338 343 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 PAX8Q06710 450 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 ACSM1Q08AH1 577 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 SFRP4Q6FHJ7 346 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-217ENST00000479161 FAHD2BQ6P2I3 314 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-217ENST00000479161 HAGHLQ6PII5 290 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-217ENST00000479161 LYPD2Q6UXB3 125 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 SERPINA12Q8IW75 414 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 DEFB108BQ8NET1 73 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 BPIFB6Q8NFQ5 453 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 OR5D14Q8NGL3 314 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 ANGPTL6Q8NI99 470 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 RAB40AQ8WXH6 277 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 FGGYQ96C11 551 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 SMIM19Q96E16 107 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 ADAT3Q96EY9 351 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-217ENST00000479161 FAHD2AQ96GK7 314 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 MED30Q96HR3 178 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 CDCA4Q9BXL8 241 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 RHOFQ9HBH0 211 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 LPAR2Q9HBW0 351 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 HES4Q9HCC6 221 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 RAB26Q9ULW5 256 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 SLC1A7O00341 560 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 ADAM20O43506 726 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 XPNPEP2O43895 674 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 RHBDL1O75783 438 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 CDK1P06493 297 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 ZNF20P17024 532 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 ATF1P18846 271 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 GLRA1P23415 457 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 VHLP40337 213 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 OR2G6Q5TZ20 316 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 DMKNQ6E0U4 476 aaPredicted RBP12.87□□□□□ -0.35
C9orf3-217ENST00000479161 ZNF788Q6ZQV5 615 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 LHFPL2Q6ZUX7 228 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 STX19Q8N4C7 294 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 NANOGP1Q8N7R0 232 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 OR13C3Q8NGS6 347 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 GPR148Q8TDV2 347 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 MYDGFQ969H8 173 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 TMIGD2Q96BF3 282 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 BORCS8Q96FH0 119 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 NRIP2Q9BQI9 281 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 DUSP21Q9H596 190 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 NLKQ9UBE8 527 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 CTSZQ9UBR2 303 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 CLEC2DQ9UHP7 191 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 TPRKBQ9Y3C4 175 aa12.87□□□□□ -0.35
C9orf3-217ENST00000479161 LOC105371242A0A075B767 164 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 IGHV2-70DA0A0C4DH43 119 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 IGKV1-9A0A0C4DH69 117 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 A6NIN4 97 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 OR2AT4A6NND4 320 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 TMPRSS2O15393 492 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 PHF1O43189 567 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-217ENST00000479161 AKR7A2O43488 359 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 FSHBP01225 129 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 GYPAP02724 150 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 AMY2BP19961 511 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 C21orf33P30042 268 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-217ENST00000479161 GTF2A1P52655 376 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-217ENST00000479161 ATP1B3P54709 279 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 WNT4P56705 351 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 SLC35A2P78381 396 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 SMIM21Q3B7S5 101 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 ZNF529Q6P280 563 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 BTNL3Q6UXE8 466 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 IZUMO2Q6UXV1 221 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 ACP7Q6ZNF0 438 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 C1orf229Q6ZS94 237 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-217ENST00000479161 AHSA2Q719I0 299 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 C1QL2Q7Z5L3 287 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 Q8IYB0 196 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 BOLLQ8N9W6 283 aaKnown RBP12.86□□□□□ -0.35
C9orf3-217ENST00000479161 C19orf18Q8NEA5 215 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 OR51A4Q8NGJ6 313 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 OR10AC1Q8NH08 325 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 SDSLQ96GA7 329 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 PDCD1LG2Q9BQ51 273 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 WDR13Q9H1Z4 485 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 ZCCHC4Q9H5U6 513 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 C7orf69Q9H7B7 122 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 MMP26Q9NRE1 261 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 DNAJB11Q9UBS4 358 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 OPN4Q9UHM6 478 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 ERGIC3Q9Y282 383 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 ZNF281Q9Y2X9 895 aa12.86□□□□□ -0.35
C9orf3-217ENST00000479161 SIGLEC5O15389 551 aa12.85□□□□□ -0.35
C9orf3-217ENST00000479161 ENSAO43768 121 aaKnown RBP12.85□□□□□ -0.35
C9orf3-217ENST00000479161 CD2P06729 351 aa12.85□□□□□ -0.35
C9orf3-217ENST00000479161 CAV3P56539 151 aa12.85□□□□□ -0.35
C9orf3-217ENST00000479161 YIF1BQ5BJH7 314 aa12.85□□□□□ -0.35
C9orf3-217ENST00000479161 XAF1Q6GPH4 301 aa12.85□□□□□ -0.35
C9orf3-217ENST00000479161 CALHM1Q8IU99 346 aa12.85□□□□□ -0.35
C9orf3-217ENST00000479161 MKXQ8IYA7 352 aa12.85□□□□□ -0.35
C9orf3-217ENST00000479161 SAXO1Q8IYX7 474 aa12.85□□□□□ -0.35
C9orf3-217ENST00000479161 NANPQ8TBE9 248 aa12.85□□□□□ -0.35
C9orf3-217ENST00000479161 GATAD2BQ8WXI9 593 aa12.85□□□□□ -0.35
C9orf3-217ENST00000479161 THRSPQ92748 146 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms