RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 CDKN2DP55273 166 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 RPL23P62829 140 aaKnown RBP-0.91□□□□□ -2.56
CALD1-218ENST00000478075 PSG9Q00887 426 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 ZNF90Q03938 601 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 GBE1Q04446 702 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 SKP2Q13309 424 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 RCAN2Q14206 197 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 ELOCQ15369 112 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 SPRNQ5BIV9 151 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 HES3Q5TGS1 186 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 FAM104BQ5XKR9 115 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 NIPAL1Q6NVV3 410 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 LYZL2Q7Z4W2 148 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 CDR2LQ86X02 465 aaPredicted RBP-0.91□□□□□ -2.56
CALD1-218ENST00000478075 RBM45Q8IUH3 476 aaKnown RBP-0.91□□□□□ -2.56
CALD1-218ENST00000478075 ORMDL3Q8N138 153 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 FAM133AQ8N9E0 248 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 OR1M1Q8NGA1 313 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 OR10AD1Q8NGE0 317 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 OR10P1Q8NGE3 313 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 OR6K6Q8NGW6 343 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 LHFPL5Q8TAF8 219 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 ZNF418Q8TF45 676 aaPredicted RBP-0.91□□□□□ -2.56
CALD1-218ENST00000478075 TNFAIP8L1Q8WVP5 186 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 RERGQ96A58 199 aaPredicted RBP-0.91□□□□□ -2.56
CALD1-218ENST00000478075 PIK3IP1Q96FE7 263 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 SLC41A3Q96GZ6 507 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 NSMCE2Q96MF7 247 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 ZNF396Q96N95 335 aaPredicted RBP-0.91□□□□□ -2.56
CALD1-218ENST00000478075 PEBP4Q96S96 227 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 RARRES2Q99969 163 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 TAPBPLQ9BX59 468 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 PECRQ9BY49 303 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 KRT23Q9C075 422 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 TLNRD1Q9H1K6 362 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 MRPL27Q9P0M9 148 aaKnown RBP-0.91□□□□□ -2.56
CALD1-218ENST00000478075 OR5V1Q9UGF6 321 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 VPREB3Q9UKI3 123 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 FBXL3Q9UKT7 428 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 CES1P1Q9UKY3 287 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 NDRG2Q9UN36 371 aaKnown RBP-0.91□□□□□ -2.56
CALD1-218ENST00000478075 NBPF19A0A087WUL8 3843 aa-0.91□□□□□ -2.56
CALD1-218ENST00000478075 PRRC2CQ9Y520 2896 aaKnown RBP-0.91□□□□□ -2.56
CALD1-218ENST00000478075 DSCAML1Q8TD84 2053 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 IQSEC2Q5JU85 1478 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 MYO7AQ13402 2215 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 ASCC3Q8N3C0 2202 aaKnown RBP-0.92□□□□□ -2.56
CALD1-218ENST00000478075 ATRQ13535 2644 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 BIVM-ERCC5R4GMW8 1640 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 NBEAL2Q6ZNJ1 2754 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 PIEZO2Q9H5I5 2752 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 A0A096LNT2 108 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 C15orf38-AP3S2A0A0A6YYH1 394 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 IGHV3-21A0A0B4J1V1 117 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 ODAMA1E959 279 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 ISPDA4D126 451 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 A6NED7 52 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 SMIM9A6NGZ8 99 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 ARGFXA6NJG6 315 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 M0QXV9 152 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 M0R2N4 97 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 TAAR5O14804 337 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 SERPINB7O75635 380 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 EIF3GO75821 320 aaKnown RBP eCLIP-0.92□□□□□ -2.56
CALD1-218ENST00000478075 SEMA3DO95025 777 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 ERCC1P07992 297 aaPredicted RBP-0.92□□□□□ -2.56
CALD1-218ENST00000478075 EVI2BP34910 448 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 SPRR1AP35321 89 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 POLR2IP36954 125 aaKnown RBP-0.92□□□□□ -2.56
CALD1-218ENST00000478075 AKR1C2P52895 323 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 PLTPP55058 493 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 SYNJ2BPP57105 145 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 OR2B6P58173 313 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 TMEM258P61165 79 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 MT1HP80294 61 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 AKR1C1Q04828 323 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 CYP24A1Q07973 514 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 SIGLEC14Q08ET2 396 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 HTR4Q13639 388 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 ENDOGQ14249 297 aaKnown RBP-0.92□□□□□ -2.56
CALD1-218ENST00000478075 ZNF345Q14585 488 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 CLINT1Q14677 625 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 LASP1Q14847 261 aaKnown RBP-0.92□□□□□ -2.56
CALD1-218ENST00000478075 PAFAH1B3Q15102 231 aaKnown RBP-0.92□□□□□ -2.56
CALD1-218ENST00000478075 ELOBQ15370 118 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 ARHGAP11BQ3KRB8 267 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 ZNF404Q494X3 552 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 FAM229BQ4G0N7 80 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 C6orf99Q4VX62 202 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 CLEC12AQ5QGZ9 265 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 CCNJQ5T5M9 372 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 MRPL2Q5T653 305 aaKnown RBP-0.92□□□□□ -2.56
CALD1-218ENST00000478075 Q5VSD8 79 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 ARMC3Q5W041 872 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 ISLR2Q6UXK2 745 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 SLC36A1Q7Z2H8 476 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 LRRC8AQ8IWT6 810 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 Q8IZM0 81 aa-0.92□□□□□ -2.56
CALD1-218ENST00000478075 PUSL1Q8N0Z8 303 aaKnown RBP-0.92□□□□□ -2.56
CALD1-218ENST00000478075 MS4A15Q8N5U1 240 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms