RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 GABRA2P47869 451 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 IL13RA1P78552 427 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 GPR157Q5UAW9 335 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 METTL11BQ5VVY1 283 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 FDX2Q6P4F2 183 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 ACP7Q6ZNF0 438 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 KCTD20Q7Z5Y7 419 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 ANGPTL5Q86XS5 388 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 CALHM1Q8IU99 346 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 BATF2Q8N1L9 274 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 TRMT10AQ8TBZ6 339 aaKnown RBP17.45■□□□□ 0.38
LIME1-204ENST00000476183 NPRL2Q8WTW4 380 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 PELI1Q96FA3 418 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 MED30Q96HR3 178 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 ZNF649Q9BS31 505 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 ADI1Q9BV57 179 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 PLEKHA1Q9HB21 404 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 SMPD3Q9NY59 655 aaPredicted RBP17.45■□□□□ 0.38
LIME1-204ENST00000476183 SLC25A10Q9UBX3 287 aaPredicted RBP17.45■□□□□ 0.38
LIME1-204ENST00000476183 MAB21L2Q9Y586 359 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 PCDHGB1Q9Y5G3 927 aa17.45■□□□□ 0.38
LIME1-204ENST00000476183 J3QLW9 94 aa17.44■□□□□ 0.38
LIME1-204ENST00000476183 GPR37O15354 613 aa17.44■□□□□ 0.38
LIME1-204ENST00000476183 NOS1APO75052 506 aaPredicted RBP17.44■□□□□ 0.38
LIME1-204ENST00000476183 UBCP0CG48 685 aaKnown RBP17.44■□□□□ 0.38
LIME1-204ENST00000476183 ZNF19P17023 458 aa17.44■□□□□ 0.38
LIME1-204ENST00000476183 MPZP25189 248 aa17.44■□□□□ 0.38
LIME1-204ENST00000476183 ACTG1P63261 375 aa17.44■□□□□ 0.38
LIME1-204ENST00000476183 BAMBIQ13145 260 aa17.44■□□□□ 0.38
LIME1-204ENST00000476183 LHFPL3Q86UP9 236 aa17.44■□□□□ 0.38
LIME1-204ENST00000476183 ZNRF1Q8ND25 227 aa17.44■□□□□ 0.38
LIME1-204ENST00000476183 CCDC54Q8NEL0 328 aa17.44■□□□□ 0.38
LIME1-204ENST00000476183 C8orf46Q8TAG6 207 aa17.44■□□□□ 0.38
LIME1-204ENST00000476183 C4orf36Q96KX1 117 aa17.44■□□□□ 0.38
LIME1-204ENST00000476183 Q96MT0 163 aa17.44■□□□□ 0.38
LIME1-204ENST00000476183 CHST5Q9GZS9 411 aa17.44■□□□□ 0.38
LIME1-204ENST00000476183 RASL12Q9NYN1 266 aa17.44■□□□□ 0.38
LIME1-204ENST00000476183 IGKV1-27A0A075B6S5 117 aa17.43■□□□□ 0.38
LIME1-204ENST00000476183 FAM230AA0A1W2PPH8 454 aa17.43■□□□□ 0.38
LIME1-204ENST00000476183 IGHA1P01876 353 aa17.43■□□□□ 0.38
LIME1-204ENST00000476183 PRTN3P24158 256 aa17.43■□□□□ 0.38
LIME1-204ENST00000476183 GALEQ14376 348 aa17.43■□□□□ 0.38
LIME1-204ENST00000476183 DEFB112Q30KQ8 113 aa17.43■□□□□ 0.38
LIME1-204ENST00000476183 CD177Q8N6Q3 437 aa17.43■□□□□ 0.38
LIME1-204ENST00000476183 H1FXQ92522 213 aaKnown RBP17.43■□□□□ 0.38
LIME1-204ENST00000476183 LHX4Q969G2 390 aa17.43■□□□□ 0.38
LIME1-204ENST00000476183 ADAT3Q96EY9 351 aaPredicted RBP17.43■□□□□ 0.38
LIME1-204ENST00000476183 SDSLQ96GA7 329 aa17.43■□□□□ 0.38
LIME1-204ENST00000476183 RDH12Q96NR8 316 aa17.43■□□□□ 0.38
LIME1-204ENST00000476183 NRIP2Q9BQI9 281 aa17.43■□□□□ 0.38
LIME1-204ENST00000476183 ALG8Q9BVK2 526 aa17.43■□□□□ 0.38
LIME1-204ENST00000476183 ELL3Q9HB65 397 aaPredicted RBP17.43■□□□□ 0.38
LIME1-204ENST00000476183 ONECUT1Q9UBC0 465 aa17.43■□□□□ 0.38
LIME1-204ENST00000476183 KPTNQ9Y664 436 aa17.43■□□□□ 0.38
LIME1-204ENST00000476183 TMEM89A2RUT3 159 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 RFPL4AA6NLU0 287 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 RFPL4AL1F8VTS6 287 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 WBP4O75554 376 aaKnown RBP17.42■□□□□ 0.38
LIME1-204ENST00000476183 HTR1AP08908 422 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 NDUFB7P17568 137 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 CAV3P56539 151 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 PDCD1Q15116 288 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 SLC9A3R2Q15599 337 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 SMN1Q16637 294 aaKnown RBP17.42■□□□□ 0.38
LIME1-204ENST00000476183 LRRC36Q1X8D7 754 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 SMIM21Q3B7S5 101 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 TMEM244Q5VVB8 128 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 LPCAT4Q643R3 524 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 VMO1Q7Z5L0 202 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 OR10AC1Q8NH08 325 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 PKIBQ9C010 78 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 PRDM13Q9H4Q3 707 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 ISG20L2Q9H9L3 353 aaKnown RBP17.42■□□□□ 0.38
LIME1-204ENST00000476183 HES4Q9HCC6 221 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 MRPS18AQ9NVS2 196 aaKnown RBP17.42■□□□□ 0.38
LIME1-204ENST00000476183 SLC7A11Q9UPY5 501 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 POLDIP2Q9Y2S7 368 aa17.42■□□□□ 0.38
LIME1-204ENST00000476183 OR4C45A6NMZ5 311 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 ANKRD65E5RJM6 399 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 GATBO75879 557 aaKnown RBP17.41■□□□□ 0.38
LIME1-204ENST00000476183 CLIC3O95833 236 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 ISG15P05161 165 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 CEBPDP49716 269 aaPredicted RBP17.41■□□□□ 0.38
LIME1-204ENST00000476183 CCR9P51686 369 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 DLX1P56177 255 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 BPIFB3P59826 476 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 ERVK11-1P61568 191 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 ACTA2P62736 377 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 ACTG2P63267 376 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 PRB3Q04118 309 aaPredicted RBP17.41■□□□□ 0.38
LIME1-204ENST00000476183 RAB40BQ12829 278 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 RCN1Q15293 331 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 PDZD9Q8IXQ8 264 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 Q8N7P7 452 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 ZNF555Q8NEP9 628 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 TMEM185AQ8NFB2 350 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 OR51A4Q8NGJ6 313 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 OR52I1Q8NGK6 324 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 GCDHQ92947 438 aaPredicted RBP17.41■□□□□ 0.38
LIME1-204ENST00000476183 C10orf35Q96D05 121 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms