RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 ZNF785A8K8V0 405 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 IGHV2-5P01817 119 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 CTSAP10619 480 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 NTHL1P78549 312 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 TMEM183BQ1AE95 376 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 NKAIN4Q8IVV8 208 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 ZFP62Q8NB50 900 aaPredicted RBP10.36□□□□□ -0.75
U2AF1-209ENST00000475639 TMEM208Q9BTX3 173 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 SEC11CQ9BY50 192 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 NAT8BQ9UHF3 227 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 YPEL5P62699 121 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 OLIG3Q7RTU3 272 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 RPS19BP1Q86WX3 136 aaKnown RBP10.35□□□□□ -0.75
U2AF1-209ENST00000475639 TUSC5Q8IXB3 177 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 FAM174AQ8TBP5 190 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 GPX8Q8TED1 209 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 ZNF256Q9Y2P7 627 aaPredicted RBP10.35□□□□□ -0.75
U2AF1-209ENST00000475639 WDR90Q96KV7 1748 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 CLEC18AA5D8T8 446 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 UTS2O95399 124 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 EPPINO95925 133 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 CDC34P49427 236 aaPredicted RBP10.35□□□□□ -0.75
U2AF1-209ENST00000475639 CYB561P49447 251 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 LBHQ53QV2 105 aaPredicted RBP10.35□□□□□ -0.75
U2AF1-209ENST00000475639 C1orf140Q5VVS0 124 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 MED25Q71SY5 747 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 CLEC18CQ8NCF0 446 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 PHYHIPLQ96FC7 376 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 FAAP24Q9BTP7 215 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 GSX1Q9H4S2 264 aaPredicted RBP10.35□□□□□ -0.75
U2AF1-209ENST00000475639 OR1A1Q9P1Q5 309 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 BRWD3Q6RI45 1802 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 PRSS38A1L453 326 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 G3V3Y1 287 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 LRP3O75074 770 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 NQO2P16083 231 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 CRISP2P16562 243 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 AGAP20933 346 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 ZBTB25P24278 435 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 PRLHRP49683 370 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 MLF2Q15773 248 aaPredicted RBP10.35□□□□□ -0.75
U2AF1-209ENST00000475639 SCGB1D4Q6XE38 83 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 GABRG1Q8N1C3 465 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 GALNT16Q8N428 558 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 OR1L4Q8NGR5 311 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 MS4A10Q96PG2 267 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 EDEM2Q9BV94 578 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 PPP1R3CQ9UQK1 317 aa10.35□□□□□ -0.75
U2AF1-209ENST00000475639 TRAV34A0A0B4J273 112 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 CLDN34H7C241 214 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 PPIHO43447 177 aaKnown RBP10.34□□□□□ -0.75
U2AF1-209ENST00000475639 SSSCA1O60232 199 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 ORM1P02763 201 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 PCBP4P57723 403 aaKnown RBP10.34□□□□□ -0.75
U2AF1-209ENST00000475639 PJVKQ0ZLH3 352 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 MFSD9Q8NBP5 474 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 WBP2Q969T9 261 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 IL23AQ9NPF7 189 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 PSENENQ9NZ42 101 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 A0A1B0GWJ7 208 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 C9orf170A2RU37 121 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 PRRG2O14669 202 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 RRP8O43159 456 aaKnown RBP10.34□□□□□ -0.75
U2AF1-209ENST00000475639 ZNF749O43361 778 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 BCL2L11O43521 198 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 SLC35E2P0CK97 266 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 SCGB1A1P11684 91 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 SFTPCP11686 197 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 OPRM1P35372 400 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 HIST1H2BAQ96A08 127 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 C2orf50Q96LR7 162 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 ZPBPQ9BS86 351 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 RSRP1Q9BUV0 290 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 UQCC1Q9NVA1 299 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 HOXC4P09017 264 aaPredicted RBP10.34□□□□□ -0.75
U2AF1-209ENST00000475639 CST5P28325 142 aaPredicted RBP10.34□□□□□ -0.75
U2AF1-209ENST00000475639 CDPF1Q6NVV7 123 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 ETV3LQ6ZN32 361 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 PARS2Q7L3T8 475 aaKnown RBP10.34□□□□□ -0.75
U2AF1-209ENST00000475639 OR10D4PQ8NGN7 298 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 RTN4IP1Q8WWV3 396 aaPredicted RBP10.34□□□□□ -0.75
U2AF1-209ENST00000475639 DOCK6Q96HP0 2047 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 TP53RKQ96S44 253 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 CDCA3Q99618 268 aaPredicted RBP10.34□□□□□ -0.75
U2AF1-209ENST00000475639 TRAV1-2A0A0B4J238 106 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 HMGN4O00479 90 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 CTNSO60931 367 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 POU2F2P09086 479 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 CD40P25942 277 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 MRPL58Q14197 206 aaKnown RBP10.34□□□□□ -0.75
U2AF1-209ENST00000475639 GPNMBQ14956 572 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 LY6G6FQ5SQ64 297 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 STPG1Q5TH74 334 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 VASH2Q86V25 355 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 ZADH2Q8N4Q0 377 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 ARRDC1Q8N5I2 433 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 DCBLD2Q96PD2 775 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 LRFN3Q9BTN0 628 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 ALX4Q9H161 411 aaPredicted RBP10.34□□□□□ -0.75
U2AF1-209ENST00000475639 GPR173Q9NS66 373 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms