RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 OR2AE1Q8NHA4 323 aa13.24□□□□□ -0.29
CPSF3-203ENST00000475482 ORAI1Q96D31 301 aa13.24□□□□□ -0.29
CPSF3-203ENST00000475482 ADAT3Q96EY9 351 aaPredicted RBP13.24□□□□□ -0.29
CPSF3-203ENST00000475482 CMTM3Q96MX0 182 aa13.24□□□□□ -0.29
CPSF3-203ENST00000475482 WDFY2Q96P53 400 aa13.24□□□□□ -0.29
CPSF3-203ENST00000475482 REPIN1Q9BWE0 567 aaKnown RBP13.24□□□□□ -0.29
CPSF3-203ENST00000475482 COMMD3Q9UBI1 195 aa13.24□□□□□ -0.29
CPSF3-203ENST00000475482 KCNS2Q9ULS6 477 aa13.24□□□□□ -0.29
CPSF3-203ENST00000475482 STAB1Q9NY15 2570 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 hCG_38984A0A1B0GV85 526 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 NGFP01138 241 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 ALDOBP05062 364 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 THBS2P35442 1172 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 MMP15P51511 669 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 FAM3AP98173 230 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 ZNF92Q03936 586 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 CNN3Q15417 329 aaKnown RBP13.23□□□□□ -0.29
CPSF3-203ENST00000475482 NKPD1Q17RQ9 610 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 ZNF718Q3SXZ3 478 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 ZNF529Q6P280 563 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 RFPL4BQ6ZWI9 263 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 NR2C2APQ86WQ0 139 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 OR13C9Q8NGT0 318 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 SLC25A40Q8TBP6 338 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 KLF14Q8TD94 323 aaPredicted RBP13.23□□□□□ -0.29
CPSF3-203ENST00000475482 UQCC2Q9BRT2 126 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 CHST5Q9GZS9 411 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 STEAP1Q9UHE8 339 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 ETV7Q9Y603 341 aa13.23□□□□□ -0.29
CPSF3-203ENST00000475482 TANC2Q9HCD6 1990 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 ZNF816-ZNF321PA0A0X1KG74 233 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 GGT3PA6NGU5 568 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 SLC17A2O00624 439 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 CTDSP2O14595 271 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 TGFAP01135 160 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 IFNA2P01563 188 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 ADH4P08319 380 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 SELEP16581 610 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 FAHP16930 419 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 ADRA2CP18825 462 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 ATF1P18846 271 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 PRKACBP22694 351 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 TALDO1P37837 337 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 MPV17P39210 176 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 GK2Q14410 553 aaPredicted RBP13.22□□□□□ -0.29
CPSF3-203ENST00000475482 RAB11BQ15907 218 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 ALKBH6Q3KRA9 238 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 CLVS2Q5SYC1 327 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 LRRC28Q86X40 367 aaPredicted RBP13.22□□□□□ -0.29
CPSF3-203ENST00000475482 JAGN1Q8N5M9 183 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 LINC01356Q8N9X3 169 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 PNLDC1Q8NA58 520 aaKnown RBP13.22□□□□□ -0.29
CPSF3-203ENST00000475482 OR6M1Q8NGM8 313 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 TRMT10AQ8TBZ6 339 aaKnown RBP13.22□□□□□ -0.29
CPSF3-203ENST00000475482 ZFAND2BQ8WV99 257 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 SPSB1Q96BD6 273 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 SLC30A2Q9BRI3 323 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 BEX2Q9BXY8 128 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 OR2J1Q9GZK6 312 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 SHARPINQ9H0F6 387 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 METTL17Q9H7H0 456 aaPredicted RBP13.22□□□□□ -0.29
CPSF3-203ENST00000475482 ABCB9Q9NP78 766 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 SPATA2Q9UM82 520 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 STARD10Q9Y365 291 aa13.22□□□□□ -0.29
CPSF3-203ENST00000475482 C5orf63A6NC05 138 aa13.21□□□□□ -0.29
CPSF3-203ENST00000475482 HCKP08631 526 aa13.21□□□□□ -0.29
CPSF3-203ENST00000475482 CD37P11049 281 aa13.21□□□□□ -0.29
CPSF3-203ENST00000475482 ETV6P41212 452 aa13.21□□□□□ -0.29
CPSF3-203ENST00000475482 GPR6P46095 362 aaPredicted RBP13.21□□□□□ -0.29
CPSF3-203ENST00000475482 PPP1CBP62140 327 aa13.21□□□□□ -0.29
CPSF3-203ENST00000475482 CCL8P80075 99 aa13.21□□□□□ -0.29
CPSF3-203ENST00000475482 FAM209AQ5JX71 171 aa13.21□□□□□ -0.29
CPSF3-203ENST00000475482 FAM120AOSQ5T036 256 aa13.21□□□□□ -0.29
CPSF3-203ENST00000475482 HES5Q5TA89 166 aa13.21□□□□□ -0.29
CPSF3-203ENST00000475482 GTF3AQ92664 365 aaKnown RBP13.21□□□□□ -0.29
CPSF3-203ENST00000475482 DIRAS2Q96HU8 199 aa13.21□□□□□ -0.29
CPSF3-203ENST00000475482 GFI1Q99684 422 aa13.21□□□□□ -0.29
CPSF3-203ENST00000475482 AKIP1Q9NQ31 210 aa13.21□□□□□ -0.29
CPSF3-203ENST00000475482 PTTG3PQ9NZH4 202 aa13.21□□□□□ -0.29
CPSF3-203ENST00000475482 RABL2AQ9UBK7 228 aaPredicted RBP13.21□□□□□ -0.29
CPSF3-203ENST00000475482 RABL2BQ9UNT1 228 aa13.21□□□□□ -0.29
CPSF3-203ENST00000475482 SLC7A11Q9UPY5 501 aa13.21□□□□□ -0.29
CPSF3-203ENST00000475482 WNK2Q9Y3S1 2297 aa13.21□□□□□ -0.29
CPSF3-203ENST00000475482 FAM25AB3EWG3 89 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 FAM25CB3EWG5 89 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 FAM25GB3EWG6 89 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 WNT9BO14905 357 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 NRASP01111 189 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 SLC2A2P11168 524 aaPredicted RBP13.2□□□□□ -0.3
CPSF3-203ENST00000475482 PTBP1P26599 531 aaKnown RBP eCLIP13.2□□□□□ -0.3
CPSF3-203ENST00000475482 HTR2CP28335 458 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 CD40LGP29965 261 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 GCH1P30793 250 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 TNFSF8P32971 234 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 ZNF93P35789 620 aaPredicted RBP13.2□□□□□ -0.3
CPSF3-203ENST00000475482 C1orf100Q5SVJ3 147 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 SPATA46Q5T0L3 261 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 ASPHD2Q6ICH7 369 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 METAP1DQ6UB28 335 aaPredicted RBP13.2□□□□□ -0.3
CPSF3-203ENST00000475482 FBXW12Q6X9E4 464 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms