RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 COL9A1P20849 921 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 B3GNTL1Q67FW5 361 aaPredicted RBP9.79□□□□□ -0.84
VAPB-204ENST00000475243 TMEM229BQ8NBD8 167 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 PP6455Q8WZ26 134 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 SRRQ9GZT4 340 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 FOXJ3Q9UPW0 622 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 SIGLEC7Q9Y286 467 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 A0A1B0GUH1 482 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 ADAM20O43506 726 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 SRP14P37108 136 aaKnown RBP9.79□□□□□ -0.84
VAPB-204ENST00000475243 RNPS1Q15287 305 aaKnown RBP9.79□□□□□ -0.84
VAPB-204ENST00000475243 NHSQ6T4R5 1651 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 SSPNQ14714 243 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 LYPD8Q6UX82 237 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 BAP18Q8IXM2 172 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 NPEPL1Q8NDH3 523 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 AAMDCQ9H7C9 122 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 SIRT5Q9NXA8 310 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 TP53BP1Q12888 1972 aaPredicted RBP9.79□□□□□ -0.84
VAPB-204ENST00000475243 KIAA1551Q9HCM1 1747 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 TRIM77I1YAP6 450 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 TRIP6Q15654 476 aaKnown RBP9.79□□□□□ -0.84
VAPB-204ENST00000475243 TMEM128Q5BJH2 165 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 PWWP2BQ6NUJ5 590 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 SLC16A12Q6ZSM3 486 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 HEATR5BQ9P2D3 2071 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 SERPINE3A8MV23 424 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 SLC17A2O00624 439 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 SUMO3P55854 103 aaPredicted RBP9.79□□□□□ -0.84
VAPB-204ENST00000475243 SUMO1P63165 101 aaKnown RBP9.79□□□□□ -0.84
VAPB-204ENST00000475243 PABPC1L2AQ5JQF8 200 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 NPTNQ9Y639 398 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 SNRPGP15A8MWD9 76 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 MASP2O00187 686 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 PTGFRP43088 359 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 BTNL3Q6UXE8 466 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 ZNF485Q8NCK3 441 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 CADM4Q8NFZ8 388 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 HGDQ93099 445 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 OCEL1Q9H607 264 aa9.79□□□□□ -0.84
VAPB-204ENST00000475243 ST8SIA5O15466 376 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 GALNSP34059 522 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 HES3Q5TGS1 186 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 TNFAIP6P98066 277 aaPredicted RBP9.78□□□□□ -0.84
VAPB-204ENST00000475243 FOXB2Q5VYV0 432 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 SH2D5Q6ZV89 423 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 ZNF680Q8NEM1 530 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 ZDHHC11Q9H8X9 412 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 PPIL1Q9Y3C6 166 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 PLXNB2O15031 1838 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 IGHV1OR15-9A0A0B4J2B8 117 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 ASPDHA6ND91 283 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 SOX8P57073 446 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 Q3ZCU0 254 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 ABI3BPQ7Z7G0 1075 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 OR2M7Q8NG81 312 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 SLC26A1Q9H2B4 701 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 ZNF586Q9NXT0 402 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 CACNA1IQ9P0X4 2223 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 PAPPA2Q9BXP8 1791 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 K7EQS6 105 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 CT62P0C5K7 136 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 PPP1CBP62140 327 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 CDK5Q00535 292 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 OXA1LQ15070 435 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 PNLIPRP3Q17RR3 467 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 ZBTB44Q8NCP5 570 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 MYOZ1Q9NP98 299 aaPredicted RBP9.78□□□□□ -0.84
VAPB-204ENST00000475243 POMT1Q9Y6A1 747 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 RREB1Q92766 1687 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 IGKV3-7A0A075B6H7 116 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 IGHV1OR21-1A0A087WYE8 117 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 A0A0B4J2E0 115 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 A0A1B0GX12 115 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 PEX11BO96011 259 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 RPS4XP62701 263 aaKnown RBP9.78□□□□□ -0.84
VAPB-204ENST00000475243 FUT7Q11130 342 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 GPR87Q9BY21 358 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 IL20Q9NYY1 176 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 FXYD1O00168 92 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 TMPRSS2O15393 492 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 CNN1P51911 297 aaKnown RBP9.78□□□□□ -0.84
VAPB-204ENST00000475243 RHOBP62745 196 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 MIDNQ504T8 468 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 BCL2L2Q92843 193 aaPredicted RBP9.78□□□□□ -0.84
VAPB-204ENST00000475243 GAL3ST2Q9H3Q3 398 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 FAM60AQ9NP50 221 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 RAB18Q9NP72 206 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 NUDT19A8MXV4 375 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 DNASE2O00115 360 aaPredicted RBP9.78□□□□□ -0.84
VAPB-204ENST00000475243 NKG7Q16617 165 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 Q1RN00 199 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 VMA21Q3ZAQ7 101 aa9.78□□□□□ -0.84
VAPB-204ENST00000475243 SCN7AQ01118 1682 aa9.77□□□□□ -0.84
VAPB-204ENST00000475243 HTN1P15515 57 aa9.77□□□□□ -0.84
VAPB-204ENST00000475243 CTGFP29279 349 aa9.77□□□□□ -0.84
VAPB-204ENST00000475243 FAM3AP98173 230 aa9.77□□□□□ -0.84
VAPB-204ENST00000475243 OR13G1Q8NGZ3 307 aa9.77□□□□□ -0.84
VAPB-204ENST00000475243 TM4SF19Q96DZ7 209 aa9.77□□□□□ -0.84
VAPB-204ENST00000475243 C10orf90Q96M02 699 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms