RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 DAP3P51398 398 aaKnown RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 RIDAP52758 137 aaKnown RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 CLDN17P56750 224 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 S100A12P80511 92 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 ROM1Q03395 351 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 GLO1Q04760 184 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 FMODQ06828 376 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 SPOCK1Q08629 439 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 FGL1Q08830 312 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 FAM27E3Q08E93 113 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 RAB11BQ15907 218 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 PAN3Q58A45 887 aaKnown RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 PABPC1L2AQ5JQF8 200 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 FAM74A1Q5RGS3 127 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 ZNF626Q68DY1 528 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 FDX2Q6P4F2 183 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 KCTD18Q6PI47 426 aaPredicted RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 CORO6Q6QEF8 472 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 ZNF627Q7L945 461 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 SLC36A1Q7Z2H8 476 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 LINC00346Q8IVM7 164 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 PDZD9Q8IXQ8 264 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 GABRG1Q8N1C3 465 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 GPR137CQ8N3F9 429 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 C17orf78Q8N4C9 275 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 SPICQ8N5J4 248 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 OR51A2Q8NGJ7 313 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 OR6X1Q8NH79 312 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 ZNF775Q96BV0 537 aaPredicted RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 SLC25A44Q96H78 314 aaPredicted RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 BOD1Q96IK1 185 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 GPN1Q9HCN4 374 aaPredicted RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 NGBQ9NPG2 151 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 OBP2BQ9NPH6 170 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 CENPMQ9NSP4 180 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 MED29Q9NX70 200 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 CRIM1Q9NZV1 1036 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 B3GAT1Q9P2W7 334 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 CGGBP1Q9UFW8 167 aaPredicted RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 PRSS50Q9UI38 385 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 LRP12Q9Y561 859 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 USP9XQ93008 2570 aaPredicted RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 FXYD6-FXYD2A0A087WZ82 144 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 LOC100289279A0A1B0GTE1 492 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 TMEM269A0A1B0GVZ9 245 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 A6NNC1 897 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 SNRPGP15A8MWD9 76 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 MCRIP1C9JLW8 97 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 TRAF3IP2O43734 574 aaPredicted RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 LMX1BO60663 402 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 EIF3GO75821 320 aaKnown RBP eCLIP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 OR2A4O95047 310 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 IGHMP01871 453 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 CD2P06729 351 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 CSF1P09603 554 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 SPP1P10451 314 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 ZNF823P16415 610 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 CRYGSP22914 178 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 COL8A1P27658 744 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 HTR2CP28335 458 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 CRABP1P29762 137 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 HOXC12P31275 282 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 S100A11P31949 105 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 FAUP35544 74 aaKnown RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 H2BFSP57053 126 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 POU3F1Q03052 451 aaPredicted RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 HLXQ14774 488 aaPredicted RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 HFEQ30201 348 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 TIMM23BQ5SRD1 257 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 GLT8D1Q68CQ7 371 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 ZNF787Q6DD87 383 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 OR10K2Q6IF99 312 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 FAM166AQ6J272 317 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 HAGHLQ6PII5 290 aaPredicted RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 FIP1L1Q6UN15 594 aaKnown RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 RBMS3Q6XE24 437 aaKnown RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 DCXRQ7Z4W1 244 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 CATSPERDQ86XM0 798 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 CBLN2Q8IUK8 224 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 C20orf196Q8IYI0 205 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 MUC20Q8N307 709 aaPredicted RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 JAGN1Q8N5M9 183 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 LINC01560Q8TB33 94 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 SCARB1Q8WTV0 552 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 SLC25A28Q96A46 364 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 MUCL1Q96DR8 90 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 SEH1LQ96EE3 360 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 ZNF385AQ96PM9 386 aaKnown RBP3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 OR2A7Q96R45 310 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 EMC6Q9BV81 110 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 FXYD6Q9H0Q3 95 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 DNTTIP1Q9H147 329 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 TMEM138Q9NPI0 162 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 NIT2Q9NQR4 276 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 GSN-AS1Q9NRJ2 163 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 TAS2R8Q9NYW2 309 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 TAS2R4Q9NYW5 299 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 CKLFQ9UBR5 152 aa3.63□□□□□ -1.83
GAPVD1-216ENST00000474637 PURGQ9UJV8 347 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms