RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SLC3A1Q07837 685 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 MZT1Q08AG7 82 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 MED22Q15528 200 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 MPPED2Q15777 294 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 TMEM42Q69YG0 159 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 DMKNQ6E0U4 476 aaPredicted RBP7.66□□□□□ -1.18
SMC4-213ENST00000472282 KCTD8Q6ZWB6 473 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 KRT74Q7RTS7 529 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 GLCCI1Q86VQ1 547 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 CELF2-AS1Q8N7Q2 184 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 CCDC54Q8NEL0 328 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 OR13C5Q8NGS8 318 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 TSEN15Q8WW01 171 aaKnown RBP7.66□□□□□ -1.18
SMC4-213ENST00000472282 OR5P3Q8WZ94 311 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 TMEM186Q96B77 213 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 SMIM19Q96E16 107 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 ADAT3Q96EY9 351 aaPredicted RBP7.66□□□□□ -1.18
SMC4-213ENST00000472282 RNF170Q96K19 258 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 MICU1Q9BPX6 476 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 RTL8AQ9BWD3 113 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 CHST5Q9GZS9 411 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 ABCB9Q9NP78 766 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 MBNL3Q9NUK0 354 aaKnown RBP7.66□□□□□ -1.18
SMC4-213ENST00000472282 C14orf119Q9NWQ9 140 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 HIF1ANQ9NWT6 349 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 WIPI2Q9Y4P8 454 aa7.66□□□□□ -1.18
SMC4-213ENST00000472282 VENTXO95231 258 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 CYB5R3P00387 301 aaPredicted RBP7.65□□□□□ -1.18
SMC4-213ENST00000472282 CELP19835 753 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 SRP14P37108 136 aaKnown RBP7.65□□□□□ -1.18
SMC4-213ENST00000472282 GPM6AP51674 278 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 BDH1Q02338 343 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 ZNF154Q13106 437 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 SPHARQ15513 63 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 TBCEQ15813 527 aaPredicted RBP7.65□□□□□ -1.18
SMC4-213ENST00000472282 ZNF826PQ6ZT77 177 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 OR1M1Q8NGA1 313 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 OR11L1Q8NGX0 322 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 TRMT10AQ8TBZ6 339 aaKnown RBP7.65□□□□□ -1.18
SMC4-213ENST00000472282 NPRL2Q8WTW4 380 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 GHSRQ92847 366 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 FGGYQ96C11 551 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 C10orf35Q96D05 121 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 WDR89Q96FK6 387 aaPredicted RBP7.65□□□□□ -1.18
SMC4-213ENST00000472282 PGLYRP3Q96LB9 341 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 HIST1H2AAQ96QV6 131 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 METTL17Q9H7H0 456 aaPredicted RBP7.65□□□□□ -1.18
SMC4-213ENST00000472282 ZNF665Q9H7R5 613 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 FN3KRPQ9HA64 309 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 C1orf123Q9NWV4 160 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 DHDHQ9UQ10 334 aa7.65□□□□□ -1.18
SMC4-213ENST00000472282 hCG_1807616A0A1W2PRN6 198 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 ISPDA4D126 451 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 OR5B21A6NL26 309 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 TMEM210A6NLX4 147 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 ZNF732B4DXR9 585 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 TMEM178BH3BS89 294 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 IFNL4K9M1U5 179 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 PLPP2O43688 288 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 GATBO75879 557 aaKnown RBP7.64□□□□□ -1.19
SMC4-213ENST00000472282 ZNF205O95201 554 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 IGHV2-5P01817 119 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 OCM2P0CE71 109 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 HSMCR30P0CW71 290 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 IRF2P14316 349 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 SOX2P48431 317 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 GNG3P63215 75 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 HOXA4Q00056 320 aaPredicted RBP7.64□□□□□ -1.19
SMC4-213ENST00000472282 ACSM1Q08AH1 577 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 CNN3Q15417 329 aaKnown RBP7.64□□□□□ -1.19
SMC4-213ENST00000472282 UBE2V2Q15819 145 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 ZNF124Q15973 351 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 CEACAM21Q3KPI0 293 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 FAM201AQ5SY85 155 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 KRTAP5-3Q6L8H2 238 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.64□□□□□ -1.19
SMC4-213ENST00000472282 OR5A2Q8NGI9 324 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 OR13C9Q8NGT0 318 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 OR51F2Q8NH61 342 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 Q8TCH9 128 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 GPR148Q8TDV2 347 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 PP6455Q8WZ26 134 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 RPL3LQ92901 407 aaKnown RBP7.64□□□□□ -1.19
SMC4-213ENST00000472282 RAB1CQ92928 201 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 ERGIC1Q969X5 290 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 TIMD4Q96H15 378 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 YTHDF1Q9BYJ9 559 aaKnown RBP7.64□□□□□ -1.19
SMC4-213ENST00000472282 ACOT13Q9NPJ3 140 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 LRCH1Q9Y2L9 728 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 ZNF281Q9Y2X9 895 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 LRRC42Q9Y546 428 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 NPTNQ9Y639 398 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 DSCAML1Q8TD84 2053 aa7.64□□□□□ -1.19
SMC4-213ENST00000472282 LOC105371242A0A075B767 164 aa7.63□□□□□ -1.19
SMC4-213ENST00000472282 IGKV1-9A0A0C4DH69 117 aa7.63□□□□□ -1.19
SMC4-213ENST00000472282 TRBV5-5A0A0J9YX44 114 aa7.63□□□□□ -1.19
SMC4-213ENST00000472282 FAM230AA0A1W2PPH8 454 aa7.63□□□□□ -1.19
SMC4-213ENST00000472282 PQLC2LA1A4F0 135 aa7.63□□□□□ -1.19
SMC4-213ENST00000472282 LRRC30A6NM36 301 aa7.63□□□□□ -1.19
SMC4-213ENST00000472282 CDIPTO14735 213 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms