RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 PCBP4P57723 403 aaKnown RBP11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SLC17A1Q14916 467 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 AGBL4Q5VU57 503 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 KLHDC1Q8N7A1 406 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR52L2PQ8NGH6 319 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR2A14Q96R47 310 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 FIZ1Q96SL8 496 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 LTB4R2Q9NPC1 389 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CEACAM6P40199 344 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SNRPNP63162 240 aaKnown RBP11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ATP6V1FQ16864 119 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PAQR9Q6ZVX9 377 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ARIH2OSQ8N7S6 290 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 NEURL2Q9BR09 285 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 GPR87Q9BY21 358 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PRSS1P07477 247 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PPP1CAP62136 330 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 FAM3AP98173 230 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 GSG1Q2KHT4 349 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ANKRD53Q8N9V6 530 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 GPX7Q96SL4 187 aaPredicted RBP11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PPIL1Q9Y3C6 166 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 A0A1W2PNV4 684 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 FCGR3BO75015 233 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TCEAL1Q15170 157 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SP6Q3SY56 376 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OSR2Q8N2R0 312 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TMEM101Q96IK0 257 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 THYN1Q9P016 225 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PLEKHB1Q9UF11 243 aaPredicted RBP11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 GDF2Q9UK05 429 aaPredicted RBP11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TMEM99Q8N816 258 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 A4GNTQ9UNA3 340 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 KCNMB2Q9Y691 235 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 DOCK5Q9H7D0 1870 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 NAT1P18440 290 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TFF2Q03403 129 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR2F1Q13607 317 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 MOGAT2Q3SYC2 334 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR4A47Q6IF82 309 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 C20orf27Q9GZN8 174 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 DUSP6Q16828 381 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 UNQ9370/PRO34162Q6UXP9 181 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR1B1Q8NGR6 318 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PRDM7Q9NQW5 492 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 DXOO77932 396 aaKnown RBP11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 KCNJ3P48549 501 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CNN1P51911 297 aaKnown RBP11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR2T2Q6IF00 324 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TAAR3PQ9P1P4 343 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 JTBO76095 146 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CTSLP07711 333 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR2A2Q6IF42 318 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR4C3Q8NH37 302 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CBR3O75828 277 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CYC1P08574 325 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 COX5AP20674 150 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CDX1P47902 265 aaPredicted RBP11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 EAF1Q96JC9 268 aaPredicted RBP11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ZDHHC5Q9C0B5 715 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RABAC1Q9UI14 185 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TRBV23-1A0A0A0MS06 115 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TMEM200CA6NKL6 621 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 LYZP61626 148 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR5AP2Q8NGF4 316 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CLDN23Q96B33 292 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TMUB1Q9BVT8 246 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CCKARP32238 428 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 MPLP40238 635 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 VMA21Q3ZAQ7 101 aa11.91□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PRSS37A4D1T9 235 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TARM1B6A8C7 271 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 HYAL3O43820 417 aaPredicted RBP11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PF4P02776 101 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SPI1P17947 270 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SPRED3Q2MJR0 410 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TMEM108Q6UXF1 575 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SHPRHQ149N8 1683 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 HSBP1O75506 76 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 GPANK1O95872 356 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SRSF5Q13243 272 aaKnown RBP11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 GGTA1PQ4G0N0 100 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 Q6ZSR9 355 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SLC39A13Q96H72 371 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 FAM53CQ9NYF3 392 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 C7orf72A4D263 438 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 HMGN4O00479 90 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 FAM87AP0C7U9 286 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ACHEP22303 614 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TNFAIP6P98066 277 aaPredicted RBP11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SPINK14Q6IE38 97 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RNASEKQ6P5S7 137 aaKnown RBP11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SLC26A10Q8NG04 563 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ANKRD36CQ5JPF3 1778 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ROS1P08922 2347 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CCDC187A0A096LP49 1063 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RPL12P30050 165 aaKnown RBP11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 LFNGQ8NES3 379 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 BAHD1Q8TBE0 780 aaPredicted RBP11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CHODLQ9H9P2 273 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms