RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 SMARCD1Q96GM5 515 aa0.22□□□□□ -2.37
COMMD3-209ENST00000471350 PYURFQ96I23 114 aa0.22□□□□□ -2.37
COMMD3-209ENST00000471350 TAC3Q9UHF0 121 aa0.22□□□□□ -2.37
COMMD3-209ENST00000471350 SAR1BQ9Y6B6 198 aa0.22□□□□□ -2.37
COMMD3-209ENST00000471350 MED13Q9UHV7 2174 aa0.22□□□□□ -2.37
COMMD3-209ENST00000471350 CRB1P82279 1406 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 COL6A6A6NMZ7 2263 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 A0A1B0GTI1 187 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 A0A1W2PRG6 482 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 FNDC10F2Z333 226 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 KLRC4-KLRK1H3BQV0 150 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 POP7O75817 140 aaKnown RBP0.21□□□□□ -2.38
COMMD3-209ENST00000471350 ETHE1O95571 254 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 GBX2P52951 348 aaPredicted RBP0.21□□□□□ -2.38
COMMD3-209ENST00000471350 OR2B8PP59922 312 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 UBE2HP62256 183 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 ITIH4Q14624 930 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 ZMYND11Q15326 602 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 STEAP4Q687X5 459 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 WDR82Q6UXN9 313 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 CYHR1Q6ZMK1 362 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 FAM231DQ6ZW35 169 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 NANOGNBQ7Z5D8 188 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 UNC93AQ86WB7 457 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 RAB43Q86YS6 212 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 SLC30A8Q8IWU4 369 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 VKORC1L1Q8N0U8 176 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 SLC25A45Q8N413 288 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 RXFP2Q8WXD0 754 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 RCN3Q96D15 328 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 XPO6Q96QU8 1125 aaKnown RBP0.21□□□□□ -2.38
COMMD3-209ENST00000471350 RETNLBQ9BQ08 111 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 MRPL20Q9BYC9 149 aaKnown RBP0.21□□□□□ -2.38
COMMD3-209ENST00000471350 PKIBQ9C010 78 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 AICDAQ9GZX7 198 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 STMN4Q9H169 189 aaPredicted RBP0.21□□□□□ -2.38
COMMD3-209ENST00000471350 MFSD1Q9H3U5 465 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 TDRD3Q9H7E2 651 aaKnown RBP0.21□□□□□ -2.38
COMMD3-209ENST00000471350 PSORS1C2Q9UIG4 136 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 SOX21Q9Y651 276 aaPredicted RBP0.21□□□□□ -2.38
COMMD3-209ENST00000471350 CR1P17927 2039 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 RGS12O14924 1447 aa0.21□□□□□ -2.38
COMMD3-209ENST00000471350 IGHV3-43A0A0B4J1X8 118 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 TRBV11-1A0A0K0K1C0 115 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 A8MWP4 228 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 F5H5P2 479 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 ZNF189O75820 626 aaPredicted RBP0.2□□□□□ -2.38
COMMD3-209ENST00000471350 CCNB2O95067 398 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 HLA-AP01891 365 aaKnown RBP0.2□□□□□ -2.38
COMMD3-209ENST00000471350 PSMB9P28065 219 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 RFC3P40938 356 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 FBXL19-AS1Q494R0 122 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 KDM4DQ6B0I6 523 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 THOC7Q6I9Y2 204 aaKnown RBP0.2□□□□□ -2.38
COMMD3-209ENST00000471350 CLEC18BQ6UXF7 455 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 ZFP82Q8N141 532 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 ZCCHC7Q8N3Z6 543 aaKnown RBP0.2□□□□□ -2.38
COMMD3-209ENST00000471350 SLC38A4Q969I6 547 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 DYNLL2Q96FJ2 89 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 TMEM175Q9BSA9 504 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 TSGA10Q9BZW7 698 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 SRRQ9GZT4 340 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 BEX1Q9HBH7 125 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 PISDQ9UG56 409 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 PITPNC1Q9UKF7 332 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 ZNF257Q9Y2Q1 563 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 U3KQK5 164 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 VWA8A3KMH1 1905 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 PTPRKQ15262 1439 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 DOCK6Q96HP0 2047 aa0.2□□□□□ -2.38
COMMD3-209ENST00000471350 IGKV1D-37A0A075B6S9 117 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 IGKV2-40A0A087WW87 121 aaPredicted RBP0.19□□□□□ -2.38
COMMD3-209ENST00000471350 TRAV8-6A0A0B4J262 113 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 HEATR9A2RTY3 570 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 A6NED7 52 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 C17orf98A8MV24 154 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 K7EPK0 472 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 ISLRO14498 428 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 LSM1O15116 133 aaKnown RBP0.19□□□□□ -2.38
COMMD3-209ENST00000471350 IGKV2D-40P01614 121 aaPredicted RBP0.19□□□□□ -2.38
COMMD3-209ENST00000471350 PTMAP06454 111 aaKnown RBP0.19□□□□□ -2.38
COMMD3-209ENST00000471350 CLTAP09496 248 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 IL9P15248 144 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 BCKDHBP21953 392 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 HTR2CP28335 458 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 HTR2BP41595 481 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 MAGEA12P43365 314 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 MTPNP58546 118 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 ZNF33AQ06730 810 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 VN1R4Q7Z5H5 301 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 OR4X1Q8NH49 305 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 C2orf15Q8WU43 125 aaKnown RBP0.19□□□□□ -2.38
COMMD3-209ENST00000471350 SPZ1Q9BXG8 430 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 ARV1Q9H2C2 271 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 ACP6Q9NPH0 428 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 PXMP2Q9NR77 195 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 RBM22Q9NW64 420 aaKnown RBP eCLIP0.19□□□□□ -2.38
COMMD3-209ENST00000471350 TAS2R9Q9NYW1 312 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 DOK5Q9P104 306 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 CYB5R1Q9UHQ9 305 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms