RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 SPNP16150 400 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 ACHEP22303 614 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 CD40LGP29965 261 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 GLRXP35754 106 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 RAD52P43351 418 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 CD300CQ08708 224 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 RAB32Q13637 225 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 ADIPOQQ15848 244 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 Q499Y3 187 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 BEX5Q5H9J7 111 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 FAM209BQ5JX69 171 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 TMEM244Q5VVB8 128 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 OR2T2Q6IF00 324 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 UNQ9370/PRO34162Q6UXP9 181 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF704Q6ZNC4 412 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 PGAP1Q75T13 922 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 RNF144BQ7Z419 303 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 COMMD2Q86X83 199 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 CENPSQ8N2Z9 138 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 MS4A15Q8N5U1 240 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 BHLHE23Q8NDY6 225 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 NUP37Q8NFH4 326 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 OR56B2PQ8NGI1 322 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 Q8TCH9 128 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 GPR148Q8TDV2 347 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 FAM222BQ8WU58 562 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 GTF3AQ92664 365 aaKnown RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 TMEM106AQ96A25 262 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 FGGYQ96C11 551 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 CMBLQ96DG6 245 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 SORCS2Q96PQ0 1159 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 DERL3Q96Q80 235 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 BCL7BQ9BQE9 202 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 SLC30A2Q9BRI3 323 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 MRPL37Q9BZE1 423 aaKnown RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 BCL2L14Q9BZR8 327 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 COMMD4Q9H0A8 199 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 MIXL1Q9H2W2 232 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 ESRP2Q9H6T0 727 aaKnown RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 ABCB9Q9NP78 766 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 NGBQ9NPG2 151 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 NOX4Q9NPH5 578 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 ABCB10Q9NRK6 738 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF275Q9NSD4 429 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 EIF3KQ9UBQ5 218 aaKnown RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 HHLA2Q9UM44 414 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 SSR3Q9UNL2 185 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 V9GYS6 101 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 CSMD2Q7Z408 3487 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 MYO18BQ8IUG5 2567 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 IGLV3-9A0A075B6K5 115 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 TRBV5-7A0A0A0MS05 114 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 IGKV1-9A0A0C4DH69 117 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 A0A1B0GVI7 797 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 TRDV1A0A1B0GX56 115 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 LOC390937A0A1W2PQ73 354 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 A6NNC1 897 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 CD300LBA8K4G0 201 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF879B4DU55 563 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 DIRC3C9JPN6 131 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 CASKO14936 926 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 HLA-DPB1P04440 258 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 UCHL1P09936 223 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 OCM2P0CE71 109 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 SLC2A2P11168 524 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 ADRA2CP18825 462 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 FGF9P31371 208 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 TNFSF8P32971 234 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 RBMXP38159 391 aaKnown RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF846Q147U1 533 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 DAZAP2Q15038 168 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF79Q15937 498 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 SP5Q6BEB4 398 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 HIST2H2BCQ6DN03 193 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 THOC7Q6I9Y2 204 aaKnown RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 RGS7BPQ6MZT1 257 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 CRIP3Q6Q6R5 217 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 Q6ZR03 302 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 DCDC5Q6ZRR9 648 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 MRPL21Q7Z2W9 205 aaKnown RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 CEACAM19Q7Z692 300 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 CROCCP3Q8IVE0 287 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 OR5AS1Q8N127 324 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 OR51A2Q8NGJ7 313 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 OR13C3Q8NGS6 347 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 DVL3Q92997 716 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 SLC25A46Q96AG3 418 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 HAVCR1Q96D42 359 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 FGF23Q9GZV9 251 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 RGCCQ9H4X1 137 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 CCDC59Q9P031 241 aaKnown RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 COMMD3Q9UBI1 195 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 PIGLQ9Y2B2 252 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 RHBDD3Q9Y3P4 386 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 RNF115Q9Y4L5 304 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 V9GYH0 126 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 UTP20O75691 2785 aaKnown RBP4.02□□□□□ -1.77
SF3B1-208ENST00000470268 FBN2P35556 2912 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 DCHS2Q6V1P9 2916 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 IQCF6A8MYZ5 107 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms