RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 PTGDSP41222 190 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 FAM3AP98173 230 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 SURF2Q15527 256 aaPredicted RBP12.21□□□□□ -0.45
GPC1-208ENST00000469694 LBHQ53QV2 105 aaPredicted RBP12.21□□□□□ -0.45
GPC1-208ENST00000469694 PLA2G2CQ5R387 149 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 C1orf100Q5SVJ3 147 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 POC1AQ8NBT0 407 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 CHST4Q8NCG5 386 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 CCDC54Q8NEL0 328 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 TERB2Q8NHR7 220 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 SLC25A43Q8WUT9 341 aaPredicted RBP12.21□□□□□ -0.45
GPC1-208ENST00000469694 SLC25A44Q96H78 314 aaPredicted RBP12.21□□□□□ -0.45
GPC1-208ENST00000469694 C5orf66Q9H5L9 145 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 GPR132Q9UNW8 380 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 A0A1W2PNU3 283 aaPredicted RBP12.21□□□□□ -0.45
GPC1-208ENST00000469694 EFNA2O43921 213 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 TXNDC12O95881 172 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 GAPDHP04406 335 aaKnown RBP12.21□□□□□ -0.45
GPC1-208ENST00000469694 THBS4P35443 961 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 SPOCK1Q08629 439 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 RSU1Q15404 277 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 OR2A2Q6IF42 318 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 CD300LFQ8TDQ1 290 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 CCNL2Q96S94 520 aaPredicted RBP12.21□□□□□ -0.45
GPC1-208ENST00000469694 RAB22AQ9UL26 194 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 RTTNQ86VV8 2226 aa12.21□□□□□ -0.46
GPC1-208ENST00000469694 A8MVM7 634 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 OTX2P32243 289 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 CD81P60033 236 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 LSM6P62312 80 aaKnown RBP12.2□□□□□ -0.46
GPC1-208ENST00000469694 ANKRD55Q3KP44 614 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 DCAF12Q5T6F0 453 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 MAMDC2Q7Z304 686 aaPredicted RBP12.2□□□□□ -0.46
GPC1-208ENST00000469694 WDFY1Q8IWB7 410 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 OR4D6Q8NGJ1 314 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 OR2Y1Q8NGV0 311 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 SPACA9Q96E40 222 aaPredicted RBP12.2□□□□□ -0.46
GPC1-208ENST00000469694 MISP3Q96FF7 219 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 GNRHR2Q96P88 292 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 METTL8Q9H825 291 aaKnown RBP12.2□□□□□ -0.46
GPC1-208ENST00000469694 RALGAPA1Q6GYQ0 2036 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 TCN2P20062 427 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 S100A10P60903 97 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 INSM1Q01101 510 aaPredicted RBP12.2□□□□□ -0.46
GPC1-208ENST00000469694 SPEM2Q0P670 501 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 CHAF1BQ13112 559 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 ACKR1Q16570 336 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 LYPD6Q86Y78 171 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 ZNF679Q8IYX0 411 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 GALNT14Q96FL9 552 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 IMMP1LQ96LU5 166 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 KCNJ16Q9NPI9 418 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 FAM212BQ9NTI7 297 aaPredicted RBP12.2□□□□□ -0.46
GPC1-208ENST00000469694 EXPH5Q8NEV8 1989 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 LOC102723996A0A087X1L8 192 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 ANKUB1A6NFN9 424 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 TSTD3H0UI37 97 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 RPL36A-HNRNPH2H7BZ11 118 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 NME2P1O60361 137 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 SUPT4H1P63272 117 aaKnown RBP12.2□□□□□ -0.46
GPC1-208ENST00000469694 SPNS3Q6ZMD2 512 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 OR4K15Q8NH41 348 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 MUCL1Q96DR8 90 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 SLC35B3Q9H1N7 401 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 GSKIPQ9P0R6 139 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 NXT1Q9UKK6 140 aaKnown RBP12.2□□□□□ -0.46
GPC1-208ENST00000469694 ZDHHC8Q9ULC8 765 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 RHBDD3Q9Y3P4 386 aa12.2□□□□□ -0.46
GPC1-208ENST00000469694 EML6Q6ZMW3 1958 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 AHSA1O95433 338 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 RELQ04864 619 aaPredicted RBP12.19□□□□□ -0.46
GPC1-208ENST00000469694 MFGE8Q08431 387 aaPredicted RBP12.19□□□□□ -0.46
GPC1-208ENST00000469694 EMC4Q5J8M3 183 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 ZNF468Q5VIY5 522 aaPredicted RBP12.19□□□□□ -0.46
GPC1-208ENST00000469694 CLEC9AQ6UXN8 241 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 NUP54Q7Z3B4 507 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 ZNF610Q8N9Z0 462 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 ST7LQ8TDW4 575 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 FAM46BQ96A09 425 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 BCO1Q9HAY6 547 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 FBXL17Q9UF56 701 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 TMED3Q9Y3Q3 217 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 CEACAM18A8MTB9 384 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 PAX1P15863 534 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 GNB3P16520 340 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 RPL12P30050 165 aaKnown RBP12.19□□□□□ -0.46
GPC1-208ENST00000469694 FOLR3P41439 243 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 RAB4BP61018 213 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 DHRS13Q6UX07 377 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 PRO1933Q9H354 126 aa12.19□□□□□ -0.46
GPC1-208ENST00000469694 CHCHD2Q9Y6H1 151 aaPredicted RBP12.19□□□□□ -0.46
GPC1-208ENST00000469694 DKK1O94907 266 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 RENP00797 406 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 DANCRP0C864 163 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 JMJD7P0C870 316 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 ZNF883P0CG24 379 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 NPY4RP50391 375 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 ZNF84P51523 738 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 SGCBQ16585 318 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 ZNF529Q6P280 563 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms