RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 H1FNTQ75WM6 255 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-207ENST00000468925 CENPVQ7Z7K6 275 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-207ENST00000468925 ADGRE4PQ86SQ3 457 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 HOGA1Q86XE5 327 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 D2HGDHQ8N465 521 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 CSNK1A1LQ8N752 337 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 CYB561A3Q8NBI2 242 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 Q8NFD4 153 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 OR4X1Q8NH49 305 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 OR4S2Q8NH73 311 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 ZCCHC10Q8TBK6 192 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 CASTOR1Q8WTX7 329 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 PTPMT1Q8WUK0 201 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-207ENST00000468925 HMGB4Q8WW32 186 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 OR1E3Q8WZA6 343 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 HAS2Q92819 552 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 CDS1Q92903 461 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 GLYATL1Q969I3 302 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF48Q96MX3 618 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-207ENST00000468925 ALKBH3Q96Q83 286 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-207ENST00000468925 OR8B4Q96RC9 309 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 GPA33Q99795 319 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 TMEM39BQ9GZU3 492 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 BANF2Q9H503 90 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 CXorf36Q9H7Y0 433 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 MTHFD2LQ9H903 347 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-207ENST00000468925 GPR35Q9HC97 309 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 PNO1Q9NRX1 252 aaKnown RBP4.29□□□□□ -1.72
SF3B1-207ENST00000468925 RXFP3Q9NSD7 469 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 SLC35D1Q9NTN3 355 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 TMEM106BQ9NUM4 274 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF701Q9NV72 531 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-207ENST00000468925 PLEK2Q9NYT0 353 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 B3GAT1Q9P2W7 334 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF223Q9UK11 482 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-207ENST00000468925 PSG11Q9UQ72 335 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 MED31Q9Y3C7 131 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 SIT1Q9Y3P8 196 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 WSB1Q9Y6I7 421 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 IGHV2OR16-5A0A0B4J2B6 119 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 OR6C6A6NF89 314 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF705FA8MVS1 300 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-207ENST00000468925 K7N7A8 449 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 LEFTY2O00292 366 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 CLDN5O00501 218 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 GEMIN2O14893 280 aaKnown RBP4.28□□□□□ -1.72
SF3B1-207ENST00000468925 ARPC3O15145 178 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 PIN1P1O15428 100 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 PRAMEF4O60810 478 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 SCAF4O95104 1147 aaKnown RBP4.28□□□□□ -1.72
SF3B1-207ENST00000468925 SEMA4FO95754 770 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 CH25HO95992 272 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 CLEC3BP05452 202 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 OR5G3P0C626 314 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF705DP0CH99 300 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF705BP0CI00 300 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-207ENST00000468925 PGA3P0DJD8 388 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 SMIM17P0DL12 118 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 OR13C7P0DN81 318 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 CEACAM1P13688 526 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 CTSEP14091 401 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 SERPINA2P20848 420 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 RBMXP38159 391 aaKnown RBP4.28□□□□□ -1.72
SF3B1-207ENST00000468925 THPOP40225 353 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 GABRA2P47869 451 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 CNN1P51911 297 aaKnown RBP4.28□□□□□ -1.72
SF3B1-207ENST00000468925 DGKEP52429 567 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 EFNA3P52797 238 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 SLC25A1P53007 311 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 PRRX1P54821 245 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 TAS2R46P59540 309 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 LCN6P62502 163 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 BTN3A2P78410 334 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 SRPXP78539 464 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 EIF3IQ13347 325 aaKnown RBP4.28□□□□□ -1.72
SF3B1-207ENST00000468925 TRA2AQ13595 282 aaKnown RBP eCLIP4.28□□□□□ -1.72
SF3B1-207ENST00000468925 PMCHL1Q16048 86 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 SMIM21Q3B7S5 101 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 C2orf76Q3KRA6 126 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 PDZD11Q5EBL8 140 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 EMC4Q5J8M3 183 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 ACTL10Q5JWF8 245 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 GFI1BQ5VTD9 330 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 AGBL4Q5VU57 503 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 PRAMEF9Q5VWM5 478 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 FAM219BQ5XKK7 198 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 WSCD1Q658N2 575 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 TMEM225Q6GV28 225 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 FAM166AQ6J272 317 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 FBXL22Q6P050 247 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 WDR73Q6P4I2 378 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 TEX38Q6PEX7 206 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 AGTRAPQ6RW13 159 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 PRSS57Q6UWY2 283 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF66Q6ZN08 573 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 SLC16A9Q7RTY1 509 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 GDF7Q7Z4P5 450 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 APCDD1LQ8NCL9 501 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 OR4D11Q8NGI4 311 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 OR5D18Q8NGL1 313 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms