RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 V9GYS6 101 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 MED12Q93074 2177 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 IGKV1D-8A0A087WSZ0 117 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 DKK1O94907 266 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 IFNA2P01563 188 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 CPT2P23786 658 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 SNRPEP62304 92 aaKnown RBP13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 ZXDAP98168 799 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 EIF3IQ13347 325 aaKnown RBP13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 ENDOGQ14249 297 aaKnown RBP13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 RSPO4Q2I0M5 234 aaPredicted RBP13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 DHRS7BQ6IAN0 325 aaPredicted RBP13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 C6orf201Q7Z4U5 140 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 FBXO17Q96EF6 278 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 TM2D1Q9BX74 207 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 SEC11CQ9BY50 192 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 CHCHD2Q9Y6H1 151 aaPredicted RBP13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 IGHV3-15A0A0B4J1V0 119 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 A0A0U1RQV5 110 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 LRP3O75074 770 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 CRYBA1P05813 215 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 RNF224P0DH78 156 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 NR2C1P13056 603 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 GABRR1P24046 479 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 RBMXP38159 391 aaKnown RBP13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 NPBWR1P48145 328 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 SURF2Q15527 256 aaPredicted RBP13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 NSUN5P2Q63ZY6 315 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 PP6455Q8WZ26 134 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 SAT2Q96F10 170 aaPredicted RBP13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 ZNF251Q9BRH9 671 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 RHOFQ9HBH0 211 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 TAF9BQ9HBM6 251 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 C1orf123Q9NWV4 160 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 MCTS1Q9ULC4 181 aaKnown RBP13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 HKR1P10072 659 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 FKBP2P26885 142 aaKnown RBP13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 EIF5AP63241 154 aaKnown RBP13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 RBM39Q14498 530 aaKnown RBP13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 LPAL2Q16609 132 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 RSPO1Q2MKA7 263 aaPredicted RBP13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 IAH1Q2TAA2 248 aaPredicted RBP13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 SLC16A14Q7RTX9 510 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 HAS2Q92819 552 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 TCEAL3Q969E4 200 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 CPNE2Q96FN4 548 aaPredicted RBP13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 SMIM8Q96KF7 97 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 ZNF385AQ96PM9 386 aaKnown RBP13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 ZNF2Q9BSG1 426 aaPredicted RBP13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 RBM24Q9BX46 236 aaKnown RBP13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 CHST5Q9GZS9 411 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 SMOC1Q9H4F8 434 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 PLEKHJ1Q9NW61 149 aa13.81□□□□□ -0.2
TSPAN4-211ENST00000468468 TP53I11O14683 189 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 SERPINA5P05154 406 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 MUC1P15941 1255 aaPredicted RBP13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 RCC1P18754 421 aaPredicted RBP13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 ARL6IP1Q15041 203 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 TRIM61Q5EBN2 209 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 SEMA6DQ8NFY4 1073 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 GLYATL2Q8WU03 294 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 PIGQQ9BRB3 760 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 CNTNAP3Q9BZ76 1288 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 DHRS7CA6NNS2 312 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 TAAR5O14804 337 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 MED6O75586 246 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 FARS2O95363 451 aaKnown RBP13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 DBHP09172 617 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 ZNF708P17019 499 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 NME2P22392 152 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 C10orf128Q5T292 105 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 OR2A2Q6IF42 318 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 EIF5AL1Q6IS14 154 aaKnown RBP13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 NRIP2Q9BQI9 281 aa13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 HDHD3Q9BSH5 251 aaPredicted RBP13.8□□□□□ -0.2
TSPAN4-211ENST00000468468 LPAR6P43657 344 aa13.79□□□□□ -0.2
TSPAN4-211ENST00000468468 CAV2P51636 162 aa13.79□□□□□ -0.2
TSPAN4-211ENST00000468468 H3F3AP84243 136 aa13.79□□□□□ -0.2
TSPAN4-211ENST00000468468 C1orf210Q8IVY1 113 aa13.79□□□□□ -0.2
TSPAN4-211ENST00000468468 SULF2Q8IWU5 870 aa13.79□□□□□ -0.2
TSPAN4-211ENST00000468468 TMEM54Q969K7 222 aa13.79□□□□□ -0.2
TSPAN4-211ENST00000468468 NABP1Q96AH0 204 aa13.79□□□□□ -0.2
TSPAN4-211ENST00000468468 RTTNQ86VV8 2226 aa13.79□□□□□ -0.2
TSPAN4-211ENST00000468468 NPIPA2E9PIF3 369 aa13.79□□□□□ -0.2
TSPAN4-211ENST00000468468 NPIPA3F8WFD2 350 aa13.79□□□□□ -0.2
TSPAN4-211ENST00000468468 M0R135 149 aa13.79□□□□□ -0.2
TSPAN4-211ENST00000468468 CELA2AP08217 269 aa13.79□□□□□ -0.2
TSPAN4-211ENST00000468468 RTL6Q6ICC9 239 aa13.79□□□□□ -0.2
TSPAN4-211ENST00000468468 SGPP2Q8IWX5 399 aa13.79□□□□□ -0.2
TSPAN4-211ENST00000468468 ZNF799Q96GE5 643 aa13.79□□□□□ -0.2
TSPAN4-211ENST00000468468 NCOA6Q14686 2063 aaPredicted RBP13.79□□□□□ -0.2
TSPAN4-211ENST00000468468 ST8SIA5O15466 376 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 DHHO43323 396 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 CA11O75493 328 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 TMEM225BP0DP42 221 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 RPL12P30050 165 aaKnown RBP13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 ZNF84P51523 738 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 SPEM2Q0P670 501 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 PPA1Q15181 289 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 FNDC9Q8TBE3 224 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms