RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 TAF15Q92804 592 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDHR3-205ENST00000468143 LHX4Q969G2 390 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 MED30Q96HR3 178 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 C1orf147Q96MC9 270 aaPredicted RBP9.53□□□□□ -0.88
CDHR3-205ENST00000468143 SIRPDQ9H106 197 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 PLEKHA1Q9HB21 404 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 TNFRSF19Q9NS68 423 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 FRRS1LQ9P0K9 344 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 SLC25A10Q9UBX3 287 aaPredicted RBP9.53□□□□□ -0.88
CDHR3-205ENST00000468143 EXOGQ9Y2C4 368 aaKnown RBP9.53□□□□□ -0.88
CDHR3-205ENST00000468143 MYRFQ9Y2G1 1151 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 MAB21L2Q9Y586 359 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 COL6A5A8TX70 2615 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 LOC107986453A0A1B0GWG9 222 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 RFPL4AA6NLU0 287 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 SNTNA6NMZ2 147 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 RFPL4AL1F8VTS6 287 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 J3QT63 122 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 SIGLEC5O15389 551 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 SLC16A6O15403 523 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 ACP7Q6ZNF0 438 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 C9orf139Q6ZV77 190 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 VMO1Q7Z5L0 202 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 ZNF573Q86YE8 665 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 ACBD7Q8N6N7 88 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 CD177Q8N6Q3 437 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 POC1AQ8NBT0 407 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 LY6G5BQ8NDX9 201 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 ZNF555Q8NEP9 628 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 TMEM185AQ8NFB2 350 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 OR2G2Q8NGZ5 317 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 ZDHHC16Q969W1 377 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 C4orf36Q96KX1 117 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 DCTN5Q9BTE1 182 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 DNTTIP1Q9H147 329 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 ISG20L2Q9H9L3 353 aaKnown RBP9.52□□□□□ -0.89
CDHR3-205ENST00000468143 SLC7A11Q9UPY5 501 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 PCDHGB1Q9Y5G3 927 aa9.52□□□□□ -0.89
CDHR3-205ENST00000468143 IGKV1-27A0A075B6S5 117 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 A0A1W2PRD5 423 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 A0A1W2PRF3 423 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 A0A1W2PRM7 423 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 TMEM89A2RUT3 159 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 DHRS7CA6NNS2 312 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 HAX1O00165 279 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 HOXA3O43365 443 aaPredicted RBP9.51□□□□□ -0.89
CDHR3-205ENST00000468143 MPZL2O60487 215 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 NXPH2O95156 264 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 CLIC3O95833 236 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 HTR1AP08908 422 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 PGA5P0DJD9 388 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 PRTN3P24158 256 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 PRDX2P32119 198 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 CAPZA1P52907 286 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 PDCD1Q15116 288 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 SLC9A3R2Q15599 337 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 SMN1Q16637 294 aaKnown RBP9.51□□□□□ -0.89
CDHR3-205ENST00000468143 KCTD20Q7Z5Y7 419 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 OR10AC1Q8NH08 325 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 APH1BQ8WW43 257 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 FGGYQ96C11 551 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 ADAT3Q96EY9 351 aaPredicted RBP9.51□□□□□ -0.89
CDHR3-205ENST00000468143 PELI1Q96FA3 418 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 Q96MT0 163 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 ALG8Q9BVK2 526 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 SIRT7Q9NRC8 400 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 SMPD3Q9NY59 655 aaPredicted RBP9.51□□□□□ -0.89
CDHR3-205ENST00000468143 RASL12Q9NYN1 266 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 OR14J1Q9UGF5 321 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 ZNF222Q9UK12 451 aa9.51□□□□□ -0.89
CDHR3-205ENST00000468143 IGHV1-69DA0A0B4J2H0 117 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 A0A1W2PQ09 198 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 E9PI62 339 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 F8VVB4 439 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 F8VWA3 439 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 GPR37O15354 613 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 FADS2O95864 444 aaKnown RBP9.5□□□□□ -0.89
CDHR3-205ENST00000468143 SERPINA3P01011 423 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 IGHV1-69P01742 117 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 UBCP0CG48 685 aaKnown RBP9.5□□□□□ -0.89
CDHR3-205ENST00000468143 FUT6P51993 359 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 GALEQ14376 348 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 RCN1Q15293 331 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 ZSCAN26Q16670 478 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 C11orf91Q3C1V1 193 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 TMEM244Q5VVB8 128 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 Q8N7P7 452 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 OR51A4Q8NGJ6 313 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 OR52I1Q8NGK6 324 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 GATAD2BQ8WXI9 593 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 SLAMF9Q96A28 289 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 BORCS8Q96FH0 119 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 SDSLQ96GA7 329 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 NRIP2Q9BQI9 281 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 POLDIP2Q9Y2S7 368 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 RPL36Q9Y3U8 105 aaKnown RBP9.5□□□□□ -0.89
CDHR3-205ENST00000468143 KPTNQ9Y664 436 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 MXRA5Q9NR99 2828 aa9.5□□□□□ -0.89
CDHR3-205ENST00000468143 IGKV1-9A0A0C4DH69 117 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 A0A0U1RQK1 487 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms