RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 Q5PR19 223 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 GPR107Q5VW38 600 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 DNM1P46Q6ZS02 220 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 SLC25A26Q70HW3 274 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 TPRA1Q86W33 373 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 TGIF2LYQ8IUE0 185 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 SAXO1Q8IYX7 474 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 RAB1CQ92928 201 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 RFT1Q96AA3 541 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 PIMREGQ9BSJ6 248 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 CENPOQ9BU64 300 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 CHD3Q12873 2000 aaKnown RBP12.81□□□□□ -0.36
SNIP1-202ENST00000468040 DYSFO75923 2080 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 TACC2O95359 2948 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 NAV2Q8IVL1 2488 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 PPIHO43447 177 aaKnown RBP12.8□□□□□ -0.36
SNIP1-202ENST00000468040 SYNGR1O43759 233 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 NOS1APO75052 506 aaPredicted RBP12.8□□□□□ -0.36
SNIP1-202ENST00000468040 RHBDL1O75783 438 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 GABARAPO95166 117 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 FSTL3O95633 263 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 LHBP01229 141 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 TMEM225BP0DP42 221 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 ART1P52961 327 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 ZP1P60852 638 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 RIN1Q13671 783 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 GCSAMQ8N6F7 178 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 POC1AQ8NBT0 407 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 OR5D18Q8NGL1 313 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 C10orf105Q8TEF2 133 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 TNFAIP8L1Q8WVP5 186 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 FAM192AQ9GZU8 254 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 RHOFQ9HBH0 211 aa12.8□□□□□ -0.36
SNIP1-202ENST00000468040 SRRM5B3KS81 715 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 TRAPPC2LH3BP13 241 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 SPRY1O43609 319 aaPredicted RBP12.79□□□□□ -0.36
SNIP1-202ENST00000468040 PGA5P0DJD9 388 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 RAB3BP20337 219 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 PTGFRP43088 359 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 RANBP1P43487 201 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 GPR6P46095 362 aaPredicted RBP12.79□□□□□ -0.36
SNIP1-202ENST00000468040 BTG1P62324 171 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 CRIP3Q6Q6R5 217 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 SLC16A12Q6ZSM3 486 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 LYPD6Q86Y78 171 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 Q8IYB0 196 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 PXT1Q8NFP0 134 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 OR51F2Q8NH61 342 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 CEP19Q96LK0 163 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 S100A13Q99584 98 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 NRIP2Q9BQI9 281 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 CNTD2Q9H8S5 307 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 SMURF1Q9HCE7 757 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 DCAF16Q9NXF7 216 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 RASL12Q9NYN1 266 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 AK6Q9Y3D8 172 aaKnown RBP12.79□□□□□ -0.36
SNIP1-202ENST00000468040 V9GY05 133 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 POLQO75417 2590 aa12.79□□□□□ -0.36
SNIP1-202ENST00000468040 ARID1AO14497 2285 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 PPIAL4EA0A075B759 164 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 SHISA3A0PJX4 238 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 PPIAL4DF5H284 164 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 AKR7A2O43488 359 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 NOL3O60936 208 aaKnown RBP12.78□□□□□ -0.36
SNIP1-202ENST00000468040 PPIAL4FP0DN26 164 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 CD37P11049 281 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 GLRA1P23415 457 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 SDC2P34741 201 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 OR3A4PP47883 348 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 BMXP51813 675 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 TMBIM6P55061 237 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 LSM3P62310 102 aaKnown RBP12.78□□□□□ -0.36
SNIP1-202ENST00000468040 BLMHQ13867 455 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 KCNJ8Q15842 424 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 RNF144BQ7Z419 303 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 CLVS1Q8IUQ0 354 aaPredicted RBP12.78□□□□□ -0.36
SNIP1-202ENST00000468040 BOLLQ8N9W6 283 aaKnown RBP12.78□□□□□ -0.36
SNIP1-202ENST00000468040 OR6M1Q8NGM8 313 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 RAB2BQ8WUD1 216 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 SLAMF9Q96A28 289 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 BCL7BQ9BQE9 202 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 RNF167Q9H6Y7 350 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 PLGRKTQ9HBL7 147 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 MTCH1Q9NZJ7 389 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 GHRLQ9UBU3 117 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 MRPS28Q9Y2Q9 187 aaKnown RBP12.78□□□□□ -0.36
SNIP1-202ENST00000468040 WIPI2Q9Y4P8 454 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 PPIAL4AQ9Y536 164 aa12.78□□□□□ -0.36
SNIP1-202ENST00000468040 FLNBO75369 2602 aaKnown RBP12.78□□□□□ -0.36
SNIP1-202ENST00000468040 NBPF19A0A087WUL8 3843 aa12.77□□□□□ -0.36
SNIP1-202ENST00000468040 CSMD2Q7Z408 3487 aa12.77□□□□□ -0.36
SNIP1-202ENST00000468040 TRAV38-1A0A0B4J264 116 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 OOEPA6NGQ2 149 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 LGALS8O00214 317 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 SLC17A2O00624 439 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 ANGPTL7O43827 346 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 ZNF780AO75290 641 aaPredicted RBP12.77□□□□□ -0.37
SNIP1-202ENST00000468040 KDM4BO94953 1096 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 NXPH2O95156 264 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 IGHV2-70P01814 119 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms