RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 GLT8D1Q68CQ7 371 aa12.79□□□□□ -0.36
NPHP4-205ENST00000466897 SLC16A12Q6ZSM3 486 aa12.79□□□□□ -0.36
NPHP4-205ENST00000466897 TPRA1Q86W33 373 aa12.79□□□□□ -0.36
NPHP4-205ENST00000466897 MKXQ8IYA7 352 aa12.79□□□□□ -0.36
NPHP4-205ENST00000466897 GCSAMQ8N6F7 178 aa12.79□□□□□ -0.36
NPHP4-205ENST00000466897 PNLDC1Q8NA58 520 aaKnown RBP12.79□□□□□ -0.36
NPHP4-205ENST00000466897 PXT1Q8NFP0 134 aa12.79□□□□□ -0.36
NPHP4-205ENST00000466897 ZNF420Q8TAQ5 688 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-205ENST00000466897 BCL7BQ9BQE9 202 aa12.79□□□□□ -0.36
NPHP4-205ENST00000466897 NPTNQ9Y639 398 aa12.79□□□□□ -0.36
NPHP4-205ENST00000466897 CACNG2Q9Y698 323 aa12.79□□□□□ -0.36
NPHP4-205ENST00000466897 IGHV3-64DA0A0J9YX35 117 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 LOC100506127A0A0U1RQW1 187 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 hCG_1807616A0A1W2PRN6 198 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 PDCD5O14737 125 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 CYB5AP00167 134 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 PGA5P0DJD9 388 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 RANBP1P43487 201 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 ASCL4Q6XD76 172 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 ZNF826PQ6ZT77 177 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 PEG10Q86TG7 708 aaKnown RBP12.78□□□□□ -0.36
NPHP4-205ENST00000466897 ANGPTL5Q86XS5 388 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 TGIF2LYQ8IUE0 185 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 KRTAP1-3Q8IUG1 177 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 Q8IYB0 196 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 POC1AQ8NBT0 407 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 C10orf105Q8TEF2 133 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 LRRC29Q8WV35 223 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 FAM168AQ92567 244 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 TIMD4Q96H15 378 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 SPACA5Q96QH8 159 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 NRIP2Q9BQI9 281 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 CENPOQ9BU64 300 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 RASL12Q9NYN1 266 aa12.78□□□□□ -0.36
NPHP4-205ENST00000466897 SHISA3A0PJX4 238 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 VWC2LB2RUY7 222 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 LYNX1G3V0Z9 82 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 SYNGR1O43759 233 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 RHBDL1O75783 438 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 LYNX1P0DP58 116 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 PTGFRP43088 359 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 ERVK11-1P61568 191 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 BLMHQ13867 455 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 CLEC12BQ2HXU8 276 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 Q5PR19 223 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 C1orf100Q5SVJ3 147 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 SLC25A26Q70HW3 274 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 FAM90A1Q86YD7 464 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 C12orf43Q96C57 262 aaKnown RBP12.77□□□□□ -0.37
NPHP4-205ENST00000466897 GPER1Q99527 375 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 PIMREGQ9BSJ6 248 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 HES4Q9HCC6 221 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 IL36GQ9NZH8 169 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 GHRLQ9UBU3 117 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 TEX15Q9BXT5 2789 aa12.77□□□□□ -0.37
NPHP4-205ENST00000466897 NOTCH2Q04721 2471 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.76□□□□□ -0.37
NPHP4-205ENST00000466897 TMEM127O75204 238 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 KDM4BO94953 1096 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 CYB5R3P00387 301 aaPredicted RBP12.76□□□□□ -0.37
NPHP4-205ENST00000466897 IGHV2-70P01814 119 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 MUC1P15941 1255 aaPredicted RBP12.76□□□□□ -0.37
NPHP4-205ENST00000466897 SLC25A16P16260 332 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 RAB3BP20337 219 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 POU3F4P49335 361 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 BMXP51813 675 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 ART1P52961 327 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 TMBIM6P55061 237 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 BTG1P62324 171 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 CTF1Q16619 201 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 GPR107Q5VW38 600 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 TEX36Q5VZQ5 186 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 FAM166AQ6J272 317 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 RNF144BQ7Z419 303 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 SATL1Q86VE3 508 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 JAGN1Q8N5M9 183 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 Q8NFD4 153 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 OR6M1Q8NGM8 313 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 RAB2BQ8WUD1 216 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 TNFAIP8L1Q8WVP5 186 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 RAB1CQ92928 201 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 RFT1Q96AA3 541 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 CEP19Q96LK0 163 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 GFI1Q99684 422 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 CNTD2Q9H8S5 307 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 SMURF1Q9HCE7 757 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 DCAF16Q9NXF7 216 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 TREM2Q9NZC2 230 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 MTCH1Q9NZJ7 389 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 V9GY05 133 aa12.76□□□□□ -0.37
NPHP4-205ENST00000466897 PPIAL4EA0A075B759 164 aa12.75□□□□□ -0.37
NPHP4-205ENST00000466897 PPIAL4DF5H284 164 aa12.75□□□□□ -0.37
NPHP4-205ENST00000466897 LGALS8O00214 317 aa12.75□□□□□ -0.37
NPHP4-205ENST00000466897 SLC17A2O00624 439 aa12.75□□□□□ -0.37
NPHP4-205ENST00000466897 SLC22A1O15245 554 aa12.75□□□□□ -0.37
NPHP4-205ENST00000466897 ZNF780AO75290 641 aaPredicted RBP12.75□□□□□ -0.37
NPHP4-205ENST00000466897 PPIAL4FP0DN26 164 aa12.75□□□□□ -0.37
NPHP4-205ENST00000466897 TMEM225BP0DP42 221 aa12.75□□□□□ -0.37
NPHP4-205ENST00000466897 CPT2P23786 658 aa12.75□□□□□ -0.37
NPHP4-205ENST00000466897 MDH2P40926 338 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms