RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 CEACAM18A8MTB9 384 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 PIN1P1O15428 100 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 MAGEB3O15480 346 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 GPX5O75715 221 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 PLATP00750 562 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 IGHV2-5P01817 119 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 IGHV4-31P0DP07 118 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 MUC1P15941 1255 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 IGFBP3P17936 291 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 GLRA1P23415 457 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 MAPK3P27361 379 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 TGFBR2P37173 567 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 GZMKP49863 264 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 RPS25P62851 125 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 PPP3R1P63098 170 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 IL24Q13007 206 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 INSL4Q14641 139 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 TRAM1Q15629 374 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 KCNJ8Q15842 424 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 MICBQ29980 383 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 BIVMQ86UB2 503 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 POC1AQ8NBT0 407 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 OR51A2Q8NGJ7 313 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 TMEM203Q969S6 136 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 RFT1Q96AA3 541 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 SPACA5Q96QH8 159 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 WDR13Q9H1Z4 485 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 NOX4Q9NPH5 578 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 CKLFQ9UBR5 152 aa12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 SF3B6Q9Y3B4 125 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 ZNF469Q96JG9 3925 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 MAP1AP78559 2803 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-208ENST00000466601 FAM157AC9JC47 383 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 NOS1APO75052 506 aaPredicted RBP12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 GYPAP02724 150 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 ALDOBP05062 364 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 ACAA1P09110 424 aaPredicted RBP12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 PGA5P0DJD9 388 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 FSTP19883 344 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 PSMA1P25786 263 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 PSMB9P28065 219 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 BDKRB2P30411 391 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 POU3F4P49335 361 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 KISS1Q15726 138 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 SSX1Q16384 188 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 CYB5R2Q6BCY4 276 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 DCDC5Q6ZRR9 648 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 SLC25A26Q70HW3 274 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 RNF144BQ7Z419 303 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 CEACAM19Q7Z692 300 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 FAM90A1Q86YD7 464 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 MKXQ8IYA7 352 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 TSPAN14Q8NG11 270 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 TMIGD2Q96BF3 282 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 SEH1LQ96EE3 360 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 C1orf159Q96HA4 380 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 ZNF488Q96MN9 340 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 ZNF696Q9H7X3 374 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 TMEM138Q9NPI0 162 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 RASL12Q9NYN1 266 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 DNAJB11Q9UBS4 358 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 MIOXQ9UGB7 285 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 FOXJ3Q9UPW0 622 aa12.09□□□□□ -0.47
DNMT3A-208ENST00000466601 TRAV8-7A0A075B6U6 113 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 A0A087WXM4 84 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 F5H0A9 414 aaPredicted RBP12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 TNFRSF13BO14836 293 aaPredicted RBP12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 NDUFA2O43678 99 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 SC5DO75845 299 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 INMTO95050 263 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 LY6G6DO95868 133 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 CYB5AP00167 134 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 WNT2P09544 360 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 RPS2P15880 293 aaKnown RBP12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 CPT2P23786 658 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 GABRA5P31644 462 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 KRTAP1-1Q07627 177 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 PDZK1IP1Q13113 114 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 CRIP3Q6Q6R5 217 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 LYPD2Q6UXB3 125 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 CLEC9AQ6UXN8 241 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 SATL1Q86VE3 508 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 BATF2Q8N1L9 274 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 LINC01356Q8N9X3 169 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 OR52N4Q8NGI2 321 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 SLAMF9Q96A28 289 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 C12orf43Q96C57 262 aaKnown RBP12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 MSI2Q96DH6 328 aaKnown RBP12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 CPNE2Q96FN4 548 aaPredicted RBP12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 CEP19Q96LK0 163 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 NRIP2Q9BQI9 281 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 GSX1Q9H4S2 264 aaPredicted RBP12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 SNTG1Q9NSN8 517 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 MTCH1Q9NZJ7 389 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 NLKQ9UBE8 527 aa12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 TEP1Q99973 2627 aaKnown RBP12.08□□□□□ -0.48
DNMT3A-208ENST00000466601 YLPM1P49750 1951 aaKnown RBP12.07□□□□□ -0.48
DNMT3A-208ENST00000466601 B4DSR2 109 aa12.07□□□□□ -0.48
DNMT3A-208ENST00000466601 CCRL2O00421 344 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms