RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 ATP1B3P54709 279 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 MALLQ13021 153 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 PRDX4Q13162 271 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 ZNF169Q14929 603 aaPredicted RBP11.69□□□□□ -0.54
UBE4B-206ENST00000466379 PDCD1Q15116 288 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 SIGIRRQ6IA17 410 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 BRICD5Q6PL45 260 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 SPICQ8N5J4 248 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 TRAF4Q9BUZ4 470 aaPredicted RBP11.69□□□□□ -0.54
UBE4B-206ENST00000466379 FN3KRPQ9HA64 309 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 SLC2A8Q9NY64 477 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 IFNA6P05013 189 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 AMY2BP19961 511 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 PDZK1IP1Q13113 114 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 SPATA46Q5T0L3 261 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 VWA1Q6PCB0 445 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 RFPL4BQ6ZWI9 263 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 OR2AK2Q8NG84 335 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 DYRK2Q92630 601 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 CPNE2Q96FN4 548 aaPredicted RBP11.69□□□□□ -0.54
UBE4B-206ENST00000466379 OCSTAMPQ9BR26 566 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 FAAP24Q9BTP7 215 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 GP6Q9HCN6 339 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 PLEKHJ1Q9NW61 149 aa11.69□□□□□ -0.54
UBE4B-206ENST00000466379 MSTNO14793 375 aa11.68□□□□□ -0.54
UBE4B-206ENST00000466379 GEMIN2O14893 280 aaKnown RBP11.68□□□□□ -0.54
UBE4B-206ENST00000466379 LILRA1O75019 489 aa11.68□□□□□ -0.54
UBE4B-206ENST00000466379 SERPINA5P05154 406 aa11.68□□□□□ -0.54
UBE4B-206ENST00000466379 TPOP07202 933 aa11.68□□□□□ -0.54
UBE4B-206ENST00000466379 H2BFSP57053 126 aa11.68□□□□□ -0.54
UBE4B-206ENST00000466379 FOXF2Q12947 444 aa11.68□□□□□ -0.54
UBE4B-206ENST00000466379 DCAF12L2Q5VW00 463 aa11.68□□□□□ -0.54
UBE4B-206ENST00000466379 FAM214BQ7L5A3 538 aa11.68□□□□□ -0.54
UBE4B-206ENST00000466379 SLC30A7Q8NEW0 376 aa11.68□□□□□ -0.54
UBE4B-206ENST00000466379 OR51F2Q8NH61 342 aa11.68□□□□□ -0.54
UBE4B-206ENST00000466379 WBP1Q96G27 269 aa11.68□□□□□ -0.54
UBE4B-206ENST00000466379 ZNF75AQ96N20 296 aa11.68□□□□□ -0.54
UBE4B-206ENST00000466379 SLA2Q9H6Q3 261 aa11.68□□□□□ -0.54
UBE4B-206ENST00000466379 ZNF701Q9NV72 531 aaPredicted RBP11.68□□□□□ -0.54
UBE4B-206ENST00000466379 SDCBPO00560 298 aaPredicted RBP11.67□□□□□ -0.54
UBE4B-206ENST00000466379 ZNF780AO75290 641 aaPredicted RBP11.67□□□□□ -0.54
UBE4B-206ENST00000466379 ZNF35P13682 527 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 NPBWR2P48146 333 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 SNU13P55769 128 aaKnown RBP11.67□□□□□ -0.54
UBE4B-206ENST00000466379 ZNF585AQ6P3V2 769 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 ASCL4Q6XD76 172 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 SLC25A26Q70HW3 274 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 FBXL14Q8N1E6 418 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 ZNF611Q8N823 705 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 ADAD2Q8NCV1 583 aaKnown RBP11.67□□□□□ -0.54
UBE4B-206ENST00000466379 CSNK2A3Q8NEV1 391 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 MARCH1Q8TCQ1 289 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 CCDC107Q8WV48 283 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 HPSE2Q8WWQ2 592 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 NANOS1Q8WY41 292 aaKnown RBP11.67□□□□□ -0.54
UBE4B-206ENST00000466379 SARAFQ96BY9 339 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.67□□□□□ -0.54
UBE4B-206ENST00000466379 DCHS1Q96JQ0 3298 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 IGKV1D-8A0A087WSZ0 117 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 FIGNL2A6NMB9 653 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 MPZP25189 248 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 KIR2DL2P43627 348 aaPredicted RBP11.67□□□□□ -0.54
UBE4B-206ENST00000466379 GPM6AP51674 278 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 GUSBP1Q15486 140 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 IGFBP7Q16270 282 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 HOGA1Q86XE5 327 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 OSR2Q8N2R0 312 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 OR5H2Q8NGV7 314 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 C1QTNF6Q9BXI9 259 aa11.67□□□□□ -0.54
UBE4B-206ENST00000466379 ALX4Q9H161 411 aaPredicted RBP11.67□□□□□ -0.54
UBE4B-206ENST00000466379 MGAQ8IWI9 3026 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 PTPRZ1P23471 2315 aaPredicted RBP11.66□□□□□ -0.54
UBE4B-206ENST00000466379 SERPINE3A8MV23 424 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 GIPP09681 153 aaPredicted RBP11.66□□□□□ -0.54
UBE4B-206ENST00000466379 TBPP20226 339 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 IL32P24001 234 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 SSTR2P30874 369 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 NPY4RP50391 375 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 IDH3GP51553 393 aaPredicted RBP11.66□□□□□ -0.54
UBE4B-206ENST00000466379 FOXC1Q12948 553 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 DHRS2Q13268 280 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 ACSF3Q4G176 576 aaPredicted RBP11.66□□□□□ -0.54
UBE4B-206ENST00000466379 ZBTB37Q5TC79 503 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 ZDHHC23Q8IYP9 409 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 EMG1Q92979 244 aaKnown RBP11.66□□□□□ -0.54
UBE4B-206ENST00000466379 CCDC120Q96HB5 630 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 SULT4A1Q9BR01 284 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 GLRX2Q9NS18 164 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 AK3Q9UIJ7 227 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 PQLC2LA1A4F0 135 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 CD300LBA8K4G0 201 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 HLA-AP01891 365 aaKnown RBP11.66□□□□□ -0.54
UBE4B-206ENST00000466379 AKR1C4P17516 323 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 CBX5P45973 191 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 HAAOP46952 286 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 TSPAN5P62079 268 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 PPP1R1AQ13522 171 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 LGALSLQ3ZCW2 172 aaPredicted RBP11.66□□□□□ -0.54
UBE4B-206ENST00000466379 LIN54Q6MZP7 749 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 ALKBH2Q6NS38 261 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms