RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 KLHDC2Q9Y2U9 406 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 ARL2BPQ9Y2Y0 163 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 MAB21L2Q9Y586 359 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 TRBV23-1A0A0A0MS06 115 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 A0A1W2PRX2 142 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 B2RBV5 119 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 ZNF732B4DXR9 585 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 DCTN3O75935 186 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 MAP2K3P46734 347 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 MNAT1P51948 309 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 CAPZA1P52907 286 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 HCCSP53701 268 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 PSMA6P60900 246 aaKnown RBP7.87□□□□□ -1.15
USP39-212ENST00000465514 GNG3P63215 75 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 TRIM25Q14258 630 aaKnown RBP7.87□□□□□ -1.15
USP39-212ENST00000465514 LRRC75BQ2VPJ9 315 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 CEACAM21Q3KPI0 293 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 CEP78Q5JTW2 689 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 CRIP3Q6Q6R5 217 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 MEPCEQ7L2J0 689 aaKnown RBP7.87□□□□□ -1.15
USP39-212ENST00000465514 KRT74Q7RTS7 529 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 PIGWQ7Z7B1 504 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 CPOQ8IVL8 374 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 MKXQ8IYA7 352 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 ZNF671Q8TAW3 534 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 FAM81AQ8TBF8 368 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 SDSLQ96GA7 329 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 RCC1LQ96I51 464 aaKnown RBP7.87□□□□□ -1.15
USP39-212ENST00000465514 CLPTM1LQ96KA5 538 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 MEGF9Q9H1U4 602 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 MUC13Q9H3R2 512 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 NIPAL2Q9H841 368 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 C19orf12Q9NSK7 152 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 LRP12Q9Y561 859 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 DSCAML1Q8TD84 2053 aa7.87□□□□□ -1.15
USP39-212ENST00000465514 A0A0U1RQV5 110 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 ACOD1A6NK06 481 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 PRODHO43272 600 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 CST1P01037 141 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 HMGN1P05114 100 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 RAP2AP10114 183 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 LYL1P12980 280 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 ALOX5APP20292 161 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 GK3PQ14409 553 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 AANATQ16613 207 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 TMEM200BQ69YZ2 307 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 HAGHLQ6PII5 290 aaPredicted RBP7.86□□□□□ -1.15
USP39-212ENST00000465514 ACP7Q6ZNF0 438 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 MOB3CQ70IA8 216 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 TRPM8Q7Z2W7 1104 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 KRT77Q7Z794 578 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 TMEM179BQ7Z7N9 219 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 ARHGAP24Q8N264 748 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 CD177Q8N6Q3 437 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 BBS1Q8NFJ9 593 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 OR5A2Q8NGI9 324 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 AQP3Q92482 292 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 RANBP3Q9H6Z4 567 aaPredicted RBP7.86□□□□□ -1.15
USP39-212ENST00000465514 HEXA-AS1Q9H8Q6 139 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 RAB18Q9NP72 206 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 PALMDQ9NP74 551 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 FAM206AQ9NX38 181 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 RASL12Q9NYN1 266 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 LAMP5Q9UJQ1 280 aa7.86□□□□□ -1.15
USP39-212ENST00000465514 TMEM269A0A1B0GVZ9 245 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 MEGF11A6BM72 1044 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 ARRDC5A6NEK1 342 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 OR5B21A6NL26 309 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 RFPL4AA6NLU0 287 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 RFPL4AL1F8VTS6 287 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 PSMD9O00233 223 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 GSC2O15499 205 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 CHST1O43916 411 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 MTRF1O75570 445 aaKnown RBP7.85□□□□□ -1.15
USP39-212ENST00000465514 SLC2A5P22732 501 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 LMO1P25800 156 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 PRDX2P32119 198 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 BMXP51813 675 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 GYS2P54840 703 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 ERVFRD-1P60508 538 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 RPS7P62081 194 aaKnown RBP7.85□□□□□ -1.15
USP39-212ENST00000465514 RPL31P62899 125 aaKnown RBP7.85□□□□□ -1.15
USP39-212ENST00000465514 CDK5Q00535 292 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 RIPPLY1Q0D2K3 151 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 SLC35D3Q5M8T2 416 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 PLCXD3Q63HM9 321 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 THAP5Q7Z6K1 395 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 COMMD2Q86X83 199 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 C11orf42Q8N5U0 333 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 OR4M1Q8NGD0 313 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 OR2T27Q8NH04 317 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 OR5K1Q8NHB7 308 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 OR51E1Q8TCB6 317 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 PIFOQ8TCI5 191 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 NSL1Q96IY1 281 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 ZNF488Q96MN9 340 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 CHID1Q9BWS9 393 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 PBOV1Q9GZY1 135 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 GPR84Q9NQS5 396 aa7.85□□□□□ -1.15
USP39-212ENST00000465514 PIGLQ9Y2B2 252 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms