RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 RNF126Q9BV68 326 aa16.26■□□□□ 0.19
TSPAN4-210ENST00000464987 PPA2Q9H2U2 334 aa16.26■□□□□ 0.19
TSPAN4-210ENST00000464987 GPR35Q9HC97 309 aa16.26■□□□□ 0.19
TSPAN4-210ENST00000464987 SERPINE3A8MV23 424 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 A8MXK9 166 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 SERPINA5P05154 406 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 PGAM2P15259 253 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 RPS2P15880 293 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 ZP3P21754 424 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 PSMB6P28072 239 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 SRYQ05066 204 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 RIPPLY1Q0D2K3 151 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 SCRN3Q0VDG4 424 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 BRICD5Q6PL45 260 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 STPG2Q8N412 459 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 GALNT11Q8NCW6 608 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 DYRK2Q92630 601 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 TAAR9Q96RI9 348 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 CDC6Q99741 560 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 FAAP24Q9BTP7 215 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 OR2H1Q9GZK4 316 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 RASL12Q9NYN1 266 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 ZNF587BE7ETH6 402 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 ZNF205O95201 554 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 FGF2P09038 288 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 RRADP55042 308 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 ZNF92Q03936 586 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 KRTAP27-1Q3LI81 207 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 CHRFAM7AQ494W8 412 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 RRNAD1Q96FB5 475 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 C12orf4Q9NQ89 552 aa16.25■□□□□ 0.19
TSPAN4-210ENST00000464987 IGKV1-12A0A0C4DH73 117 aa16.24■□□□□ 0.19
TSPAN4-210ENST00000464987 CYTIPO60759 359 aa16.24■□□□□ 0.19
TSPAN4-210ENST00000464987 TSPAN9O75954 239 aa16.24■□□□□ 0.19
TSPAN4-210ENST00000464987 NEURL1O76050 574 aa16.24■□□□□ 0.19
TSPAN4-210ENST00000464987 IGKV1D-12P01611 117 aa16.24■□□□□ 0.19
TSPAN4-210ENST00000464987 CNR1P21554 472 aa16.24■□□□□ 0.19
TSPAN4-210ENST00000464987 TAS2R46P59540 309 aa16.24■□□□□ 0.19
TSPAN4-210ENST00000464987 TSPO2Q5TGU0 170 aa16.24■□□□□ 0.19
TSPAN4-210ENST00000464987 C9orf135Q5VTT2 229 aa16.24■□□□□ 0.19
TSPAN4-210ENST00000464987 RPUSD3Q6P087 351 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-210ENST00000464987 ZSCAN4Q8NAM6 433 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-210ENST00000464987 BVESQ8NE79 360 aa16.24■□□□□ 0.19
TSPAN4-210ENST00000464987 EMG1Q92979 244 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-210ENST00000464987 OR10C1Q96KK4 312 aa16.24■□□□□ 0.19
TSPAN4-210ENST00000464987 KNG1P01042 644 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 CDCP2Q5VXM1 449 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 TMEM17Q86X19 198 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 PXT1Q8NFP0 134 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 DCUN1D4Q92564 292 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 NMES1Q9C002 83 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 MS4A7Q9GZW8 240 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 SLC25A32Q9H2D1 315 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 LOC400499M0QZD8 3231 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 ASPMQ8IZT6 3477 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 SIGLEC5O15389 551 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 EDN3P14138 238 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 NUP62P37198 522 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 FAM3AP98173 230 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 PDCD1Q15116 288 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 RSU1Q15404 277 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 PIGYQ3MUY2 71 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 BATF2Q8N1L9 274 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 INO80EQ8NBZ0 244 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 CPEB3Q8NE35 698 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 SPSB1Q96BD6 273 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 STRADBQ9C0K7 418 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 METTL9Q9H1A3 318 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 LIME1Q9H400 295 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 BARX1Q9HBU1 254 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 TIMM10BQ9Y5J6 103 aa16.23■□□□□ 0.19
TSPAN4-210ENST00000464987 SHANK1Q9Y566 2161 aa16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 F5H0A9 414 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 NRASP01111 189 aa16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 CSTBP04080 98 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 OPRM1P35372 400 aa16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 FOXG1P55316 489 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 CPNE4Q96A23 557 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 BORCS8Q96FH0 119 aa16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 AK3Q9UIJ7 227 aa16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 KMT2EQ8IZD2 1858 aa16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 hCG_38984A0A1B0GV85 526 aa16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 MMP7P09237 267 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 PTGER4P35408 488 aa16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 CCDC54Q8NEL0 328 aa16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 OR2M7Q8NG81 312 aa16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 ZNF2Q9BSG1 426 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 PLA2G3Q9NZ20 509 aa16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 OR5AC2Q9NZP5 309 aa16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 SESN1Q9Y6P5 492 aa16.22■□□□□ 0.19
TSPAN4-210ENST00000464987 FAM221AA4D161 298 aa16.21■□□□□ 0.19
TSPAN4-210ENST00000464987 MSGN1A6NI15 193 aa16.21■□□□□ 0.19
TSPAN4-210ENST00000464987 GEMIN2O14893 280 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-210ENST00000464987 RBP2P50120 134 aa16.21■□□□□ 0.19
TSPAN4-210ENST00000464987 CNN3Q15417 329 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-210ENST00000464987 ZNF528Q3MIS6 628 aa16.21■□□□□ 0.19
TSPAN4-210ENST00000464987 PABPC1L2AQ5JQF8 200 aa16.21■□□□□ 0.19
TSPAN4-210ENST00000464987 RIPPLY2Q5TAB7 128 aa16.21■□□□□ 0.19
TSPAN4-210ENST00000464987 TMEM42Q69YG0 159 aa16.21■□□□□ 0.19
TSPAN4-210ENST00000464987 ELP2Q6IA86 826 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms